From the MRI scans of brain, identify which are having tumor.
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Updated
Aug 3, 2020 - Jupyter Notebook
From the MRI scans of brain, identify which are having tumor.
Brain Segmentation
Brain tumor classification based on MGMT methylation status present on the tumor cell.
Implementation of the Mean Teacher method for brain lesion segmentation based on DeepMedic, from paper published in IPMI 2019
Useful functions and pipelines for brain tumor segmentation.
Segmentation of brain tumors (Glioma) in MRIs using Meta's model SAM (Segment anything model)
Bachelor Thesis Code: Interpretability of Image Segmentation Models
Using the BraTS2020 dataset, we test several approaches for brain tumour segmentation such as developing novel models we call 3D-ONet and 3D-SphereNet, our own variant of 3D-UNet with more than one encoder-decoder paths.
The BRATS Toolkit is a suite of tools designed to facilitate the processing and analysis of the Brain Tumor Segmentation (BRATS) dataset.
Brain Tumor Segmentation Pipeline for BraTS Challenge
Optimized U-Net for Brain Tumor Segmentation
We segmented the Brain tumor using Brats dataset and as we know it is in 3D format we used the slicing method in which we slice the images in 2D form according to its 3 axis and then giving the model for training then combining waits to segment brain tumor. We used UNET model for training our dataset.
Multimodal Brain Tumor Segmentation Boosted by Monomodal Normal Brain Images
A modular, 3D unet built in keras for 3D medical image segmentation. Also includes useful classes for extracting and training on 3D patches for data augmentation or memory efficiency.
Interactive Brain Tumor Segmentation with FocalClick and CDNet
Repository with models, experiments and approaches for the BraTS 2017 and iSeg segmentation challenges.
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