Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.
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Updated
May 25, 2024 - C++
Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.
Mother machine image analysis through napari
PyTorch Connectomics: segmentation toolbox for EM connectomics
A generalizable application framework for segmentation, regression, and classification using PyTorch
Open source Python library for building bioimage analysis pipelines
Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)
Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries (4, 8, & 6)
Image pyramid generation for grayscale and segmentation image resize.
Tools for computational pathology
Projekt u sklopu predmeta Analiza slika u biomedicini
Medical image augmentation tool that can be integrated with Pytorch & MONAI.
A course in biomedical image analytics by Prof. Dmitry V. Dylov
Read and write Neuroglancer datasets programmatically.
Fracture Detection in Pediatric Wrist Trauma X-ray Images Using YOLOv8 Algorithm
gui suite for biomedic profesional (dentist) coded on python
Mesh-based Monte Carlo (MMC)
Context-dependent Probabilistic Prior Information for Improved Compressed Sensing MRI Reconstruction
Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D (Volumetric) Image Volumes
Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis
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