Tools created for sharing of MRI and behavioural data as part of my work with Professor Kate Watkins in the Speech & Brain Lab at the University of Oxford.
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Updated
Feb 25, 2021 - Shell
Tools created for sharing of MRI and behavioural data as part of my work with Professor Kate Watkins in the Speech & Brain Lab at the University of Oxford.
MATLAB code for MEG-BIDS. See also meg-bids-python (Python version).
Scripts to convert redcap api exports to bids format
Rapid and automated conversion of neuroimaging data to BIDS
Scripts in bash and python to manipulate dicom images
HED Standard Organization Profile Page
Tool to help parse very large BIDS datasets
BIDSAlign a library for preprocessing and align multiple datasets to a common template.
Web guided ReproIn MR scan sequence namer and name->nifti pipeline checker
Portable, modular, reusable, and reproducible processing pipeline software for fetal brain MRI super-resolution
Tutorials for organising MEG/EEG and MRI data into BIDS standard.
Easily convert to, organize, and manage BIDS imaging data in Python
Template for new EEG studies in NCIL, using BIDS-compliant structure and scripts to import data.
Brain Hack School 2021 project that explores the stages of data preprocessing up to machine learning classification.
Convert HCP Lifespan, Aging, and Development data to BIDS format
Create a BIDS structure for a DICOM folder.
Add a description, image, and links to the bids-format topic page so that developers can more easily learn about it.
To associate your repository with the bids-format topic, visit your repo's landing page and select "manage topics."