Computational tools for single molecule localization / superresolution microscopy (point clouds).
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Updated
Aug 29, 2023 - Julia
Computational tools for single molecule localization / superresolution microscopy (point clouds).
Code written for assignments in CMPT 825: Natural Language Processing at Simon Fraser University, Fall 2018
Houses a snakemake workflow used for multiple sequence alignment and maximum likelihood phylogeny construction of genes or proteins. Originally used to study sex determination genes in mosquitoes.
A keypoints image alignment algorithm to calculate and align two separate images.
[a.a. 23/24] M. Gambardella
affine gap penalty local alignment and affine gap penalty global alignment
Byte packing conversions using #pragma and C++
Replication package for SO processing for bitext
STAR task for RNA-seq workflow
A simple table to include in ggplot
Warp T1 and tensor volumes with a given non-linear warp.nii.gz using ANTs.
Boids animation in Processing. Boids simulate the flocking behavior of birds, based on alignment, separation, and cohesion.
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