3c
Here are 11 public repositories matching this topic...
Using chromatin-chromatin interaction scores generated by the Capture Hi-C technology, I developed this R code during my six week internship in the Spicuglia lab, part of the INSERM institute (TAGC) related to the Aix-Marseille University, France, in order to identify the DNA interactions happening between different regions, specifically the int…
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Mar 5, 2023
Tool for chromatin 3D structure reconstruction from 3C experimental data. Improvement of ShRec3D.
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Aug 21, 2017 - Python
Simple 3C milling simulator with path generation module.
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Jun 23, 2020 - C++
Metagenomic binning based on Hi-C data
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Mar 27, 2024 - Python
Software for comparing contact maps from HiC, CaptureC and other 3D genome data.
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May 21, 2018 - Jupyter Notebook
Simple library/pipeline to generate and handle Hi-C data.
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May 30, 2024 - Python
Large genome reassembly based on Hi-C data, continuation of GRAAL
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Mar 20, 2024 - Cuda
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