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Opening a local file #14

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universvm opened this issue May 13, 2024 · 1 comment
Open

Opening a local file #14

universvm opened this issue May 13, 2024 · 1 comment

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@universvm
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Hi there,

I've been finding it quite hard to understand how to use the tool with a custom .fasta file. in my case I completely removed all the sequences from the sample_files and added my own (for template.fasta).

Now when I open the template.html I still see this
Screenshot 2024-05-13 at 08 48 20

It seems like rather than loading the local files you are using an online repository for downloading the fasta which doesn't seem user-friendly. In your instructions you say:


2: Then, place your pairwise or multiple sequence alignment (MSA) result file as FASTA format in the folder.

3: Afterwards, set your parameters and define the title, specify the annotations such as protein domains and add your variations in the HTML file.

Point 2 is done. Point 3 sounds like 4 or 5 steps merged into one. Do you have an example of the tool that runs from a local fasta? It's a shame, this is such a good tool but seems usable only by messing with the HTML.

@universvm
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As it seemed like a very small thing, I've added a file uploader to your code so that users can actually load their fasta without messing with the HTML.

Feel free to merge it if you like.

template.html.zip

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