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DESCRIPTION
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DESCRIPTION
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Package: tabula
Title: Analysis and Visualization of Archaeological Count Data
Version: 3.0.1.9000
Authors@R: c(
person("Nicolas", "Frerebeau", , "nicolas.frerebeau@u-bordeaux-montaigne.fr", role = c("aut", "cre"),
comment = c(ORCID = "0000-0001-5759-4944", affiliation = "Université Bordeaux Montaigne")),
person("Brice", "Lebrun", , "brice.lebrun@u-bordeaux-montaigne.fr", role = "ctb",
comment = c(ORCID = "0000-0001-7503-8685", affiliation = "Université Bordeaux Montaigne")),
person("Matthew", "Peeples", , "matthew.peeples@asu.edu", role = "ctb",
comment = c(ORCID = "0000-0003-4496-623X", affiliation = "Arizona State University")),
person("Ben", "Marwick", , "bmarwick@uw.edu", role = "ctb",
comment = c(ORCID = "0000-0001-7879-4531", affiliation = "University of Washington")),
person("Anne", "Philippe", , "anne.philippe@univ-nantes.fr", role = "ctb",
comment = c(ORCID = "0000-0002-5331-5087", affiliation = "Université de Nantes")),
person("Jean-Baptiste", "Fourvel", , "jean-baptiste.fourvel@univ-amu.fr", role = "ctb",
comment = c(ORCID = "0000-0002-1061-4642", affiliation = "CNRS")),
person("Université Bordeaux Montaigne", role = "fnd"),
person("CNRS", role = "fnd")
)
Maintainer: Nicolas Frerebeau <nicolas.frerebeau@u-bordeaux-montaigne.fr>
Description: An easy way to examine archaeological count data. This
package provides several tests and measures of diversity:
heterogeneity and evenness (Brillouin, Shannon, Simpson, etc.),
richness and rarefaction (Chao1, Chao2, ACE, ICE, etc.), turnover and
similarity (Brainerd-Robinson, etc.). It allows to easily visualize
count data and statistical thresholds: rank vs abundance plots,
heatmaps, Ford (1962) and Bertin (1977) diagrams, etc.
License: GPL (>= 3)
URL: https://packages.tesselle.org/tabula/,
https://github.com/tesselle/tabula
BugReports: https://github.com/tesselle/tabula/issues
Depends:
R (>= 3.5)
Imports:
arkhe (>= 1.6.0),
graphics,
grDevices,
methods,
stats,
utils
Suggests:
folio (>= 1.4.0),
khroma (>= 1.12.0),
knitr,
markdown,
rsvg,
svglite,
tinysnapshot,
tinytest
VignetteBuilder:
knitr
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.0
Collate:
'AllClasses.R'
'AllGenerics.R'
'coerce.R'
'data.R'
'index_diversity.R'
'index_heterogeneity.R'
'index_rarefaction.R'
'index_richness.R'
'index_similarity.R'
'index_test.R'
'index_turnover.R'
'matrigraph.R'
'mutators.R'
'plot_bertin.R'
'plot_diceleraas.R'
'plot_diversity.R'
'plot_ford.R'
'plot_heatmap.R'
'plot_matrix.R'
'plot_rank.R'
'plot_rarefaction.R'
'plot_spot.R'
'reexport.R'
'seriograph.R'
'show.R'
'statistics.R'
'subset.R'
'tabula-deprecated.R'
'tabula-internal.R'
'tabula-package.R'
'validate.R'
'zzz.R'