{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":40009584,"defaultBranch":"master","name":"slideToolKit","ownerLogin":"swvanderlaan","currentUserCanPush":false,"isFork":true,"isEmpty":false,"createdAt":"2015-07-31T14:38:39.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/8877879?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1709129502.0","currentOid":""},"activityList":{"items":[{"before":"ecf4491511df6c2f8474238c97813167d5b36b6c","after":"fe6a01727758a2ba65b7ddec4f2734282f3620b0","ref":"refs/heads/master","pushedAt":"2024-05-22T19:25:28.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"Updated all pipelines and methods documentation (#27)\n\n* Upgrade pipelines & upgrade_study for stains: CD68, EVG, and SR\r\n\r\n* Upgrade pipelines & upgrade_study for stains: CD34 (DAB & LRP), FIBRIN, and SMA\r\n\r\n* Updated all pipelines and methods documentation (CD34, CD68, CD66b, EVG, FIBRIN, GLYCC, HE, SMA, SR)\r\n\r\n---------\r\n\r\nCo-authored-by: Tim Peters ","shortMessageHtmlLink":"Updated all pipelines and methods documentation (#27)"}},{"before":"dba756461fb6359b66d78ec47635f9f747f3e809","after":"ccf0d93de22faeb93b3edb0b0862ce220bbeab97","ref":"refs/heads/devel_pipelines","pushedAt":"2024-05-17T14:52:12.000Z","pushType":"push","commitsCount":29,"pusher":{"login":"timpeters03","name":null,"path":"/timpeters03","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23654686?s=80&v=4"},"commit":{"message":"Updated all pipelines and methods documentation (CD34, CD68, CD66b, EVG, FIBRIN, GLYCC, HE, SMA, SR)","shortMessageHtmlLink":"Updated all pipelines and methods documentation (CD34, CD68, CD66b, E…"}},{"before":"c3a61472e8d6ac5b2f633f2ec29fd9848b0c43ec","after":"ecf4491511df6c2f8474238c97813167d5b36b6c","ref":"refs/heads/master","pushedAt":"2024-04-11T16:09:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"fixed","shortMessageHtmlLink":"fixed"}},{"before":"902d942adb09c5ef7317bb6549e0e5786f1173ab","after":"c3a61472e8d6ac5b2f633f2ec29fd9848b0c43ec","ref":"refs/heads/master","pushedAt":"2024-04-11T16:08:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"fixed issue where it didnot recognize the TIF files","shortMessageHtmlLink":"fixed issue where it didnot recognize the TIF files"}},{"before":"96e12f663ff00b4b9cfde13e983ba395e52ebc2d","after":"902d942adb09c5ef7317bb6549e0e5786f1173ab","ref":"refs/heads/master","pushedAt":"2024-04-11T16:05:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"updates","shortMessageHtmlLink":"updates"}},{"before":"59c343d03acae3e5bc65d74f3a53923b79ee6fd2","after":"96e12f663ff00b4b9cfde13e983ba395e52ebc2d","ref":"refs/heads/master","pushedAt":"2024-04-11T15:55:19.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"updates","shortMessageHtmlLink":"updates"}},{"before":"a94a1b10cf79b19b07d269a6be574b51cccec66e","after":"59c343d03acae3e5bc65d74f3a53923b79ee6fd2","ref":"refs/heads/master","pushedAt":"2024-04-11T15:52:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"fixed","shortMessageHtmlLink":"fixed"}},{"before":"30a891c96ea2c2005930082746e4a23728fe0f79","after":"a94a1b10cf79b19b07d269a6be574b51cccec66e","ref":"refs/heads/master","pushedAt":"2024-04-11T15:50:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"updates","shortMessageHtmlLink":"updates"}},{"before":"5adb68dea0e512327d353fc957a76fbe8f48c774","after":"30a891c96ea2c2005930082746e4a23728fe0f79","ref":"refs/heads/master","pushedAt":"2024-04-11T15:48:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"fixes","shortMessageHtmlLink":"fixes"}},{"before":"ffa0dc4366f52e504ec4187298e0bdeb34db1d3b","after":"5adb68dea0e512327d353fc957a76fbe8f48c774","ref":"refs/heads/master","pushedAt":"2024-04-11T15:46:43.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"updates","shortMessageHtmlLink":"updates"}},{"before":"2dc992773ec0575ed5eb2a63afcfb2f8c6f2d9ec","after":"ffa0dc4366f52e504ec4187298e0bdeb34db1d3b","ref":"refs/heads/master","pushedAt":"2024-04-11T15:46:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"updates","shortMessageHtmlLink":"updates"}},{"before":"7cbe4efc321c86ebe599ccbc1b0b758fdd32d7aa","after":"2dc992773ec0575ed5eb2a63afcfb2f8c6f2d9ec","ref":"refs/heads/master","pushedAt":"2024-04-11T15:39:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"fixed","shortMessageHtmlLink":"fixed"}},{"before":"872f560fc6c7c8cd300da4e78f5de78aabf92d00","after":"7cbe4efc321c86ebe599ccbc1b0b758fdd32d7aa","ref":"refs/heads/master","pushedAt":"2024-04-11T15:36:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"fixed","shortMessageHtmlLink":"fixed"}},{"before":"2d4536e32d4d1d2a3fcf40f5792c09b828c0e03f","after":"872f560fc6c7c8cd300da4e78f5de78aabf92d00","ref":"refs/heads/master","pushedAt":"2024-04-11T15:34:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"updates","shortMessageHtmlLink":"updates"}},{"before":"a02b92d74c21e9327cdd013ab513b0fba111546a","after":"2d4536e32d4d1d2a3fcf40f5792c09b828c0e03f","ref":"refs/heads/master","pushedAt":"2024-04-11T15:33:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"updates","shortMessageHtmlLink":"updates"}},{"before":"c59ee6d4c28985745fda43b6a2c6e6dbbaf62b02","after":"a02b92d74c21e9327cdd013ab513b0fba111546a","ref":"refs/heads/master","pushedAt":"2024-04-11T15:30:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"adjusted","shortMessageHtmlLink":"adjusted"}},{"before":"27975c237007fdf77effbb2bf3455043f8bef1b3","after":"c59ee6d4c28985745fda43b6a2c6e6dbbaf62b02","ref":"refs/heads/master","pushedAt":"2024-04-11T15:14:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"fixed so that the function continues after it finds a sample","shortMessageHtmlLink":"fixed so that the function continues after it finds a sample"}},{"before":"c38d3faba1c90df2a902c22f80c5f6547aa308e8","after":"27975c237007fdf77effbb2bf3455043f8bef1b3","ref":"refs/heads/master","pushedAt":"2024-04-11T15:09:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"fixes;","shortMessageHtmlLink":"fixes;"}},{"before":"1e8bd5250911c1296d838052148c6870e4a22848","after":"c38d3faba1c90df2a902c22f80c5f6547aa308e8","ref":"refs/heads/master","pushedAt":"2024-04-11T15:02:07.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"fixes","shortMessageHtmlLink":"fixes"}},{"before":"59a5fe77ac152964115b0b3eb34f9d07ace25f1b","after":"1e8bd5250911c1296d838052148c6870e4a22848","ref":"refs/heads/master","pushedAt":"2024-04-11T15:00:07.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"fixes","shortMessageHtmlLink":"fixes"}},{"before":"62e15ed6dfb74ff11d469998118e8f06e7698d75","after":"59a5fe77ac152964115b0b3eb34f9d07ace25f1b","ref":"refs/heads/master","pushedAt":"2024-04-11T14:59:29.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"fixes","shortMessageHtmlLink":"fixes"}},{"before":"a5e24dfc016938179e33d8fcafde9058baf9eb23","after":"62e15ed6dfb74ff11d469998118e8f06e7698d75","ref":"refs/heads/master","pushedAt":"2024-04-11T13:57:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"fixed the assignment of check_only_results","shortMessageHtmlLink":"fixed the assignment of check_only_results"}},{"before":"eefcd414cdd34b450204d6bc1dee2a57d6037370","after":"a5e24dfc016938179e33d8fcafde9058baf9eb23","ref":"refs/heads/master","pushedAt":"2024-04-11T13:52:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"fixed the writing of the log file to the current working directory","shortMessageHtmlLink":"fixed the writing of the log file to the current working directory"}},{"before":"d880a9404029d5e7a978a4c245957afa5a7572a8","after":"eefcd414cdd34b450204d6bc1dee2a57d6037370","ref":"refs/heads/master","pushedAt":"2024-04-11T13:48:21.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"updated the help information for check_only","shortMessageHtmlLink":"updated the help information for check_only"}},{"before":"3fcec613c866c78084b21ad2d45b4c65977c6f20","after":"d880a9404029d5e7a978a4c245957afa5a7572a8","ref":"refs/heads/master","pushedAt":"2024-04-11T13:46:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"fixes with indendents and added check_only_results","shortMessageHtmlLink":"fixes with indendents and added check_only_results"}},{"before":"260eb500fb2aafdae0d25f4ecef6e25169013ced","after":"3fcec613c866c78084b21ad2d45b4c65977c6f20","ref":"refs/heads/master","pushedAt":"2024-04-11T13:43:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"added function to only list existence of given samples","shortMessageHtmlLink":"added function to only list existence of given samples"}},{"before":"e9330ce8472419cbb6e44a809f6cdcdacfb478d6","after":"260eb500fb2aafdae0d25f4ecef6e25169013ced","ref":"refs/heads/master","pushedAt":"2024-04-11T13:07:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"Updates to slideQuantify, results summation, results appending, extracting tiles and wrapping up results","shortMessageHtmlLink":"Updates to slideQuantify, results summation, results appending, extra…"}},{"before":"7580bba8f38cc541a6d8e5bd508dbda0593fb1ea","after":"dba756461fb6359b66d78ec47635f9f747f3e809","ref":"refs/heads/devel_pipelines","pushedAt":"2024-04-03T06:41:24.000Z","pushType":"push","commitsCount":6,"pusher":{"login":"timpeters03","name":null,"path":"/timpeters03","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23654686?s=80&v=4"},"commit":{"message":"Upgrade pipelines & upgrade_study for stains: CD34 (DAB & LRP), FIBRIN, and SMA","shortMessageHtmlLink":"Upgrade pipelines & upgrade_study for stains: CD34 (DAB & LRP), FIBRI…"}},{"before":"13bf5063ae8d317082627fad06d0f71b073caf6b","after":"e9330ce8472419cbb6e44a809f6cdcdacfb478d6","ref":"refs/heads/master","pushedAt":"2024-03-20T15:05:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"Fixed an issue where the copy-directory given through --copy-dir was not correctly made.","shortMessageHtmlLink":"Fixed an issue where the copy-directory given through --copy-dir was …"}},{"before":"9c12f4bb05f707e4fc94e0c21594e6243b332cb9","after":"13bf5063ae8d317082627fad06d0f71b073caf6b","ref":"refs/heads/master","pushedAt":"2024-03-20T14:59:21.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"swvanderlaan","name":"Sander W. van der Laan","path":"/swvanderlaan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8877879?s=80&v=4"},"commit":{"message":"Fixed an issue where all samples containing the sample-number were collected, instead of the exact sample-number only.","shortMessageHtmlLink":"Fixed an issue where all samples containing the sample-number were co…"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEUU2uEAA","startCursor":null,"endCursor":null}},"title":"Activity · swvanderlaan/slideToolKit"}