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rarecoal.cabal
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rarecoal.cabal
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-- Initial rarecoal.cabal generated by cabal init. For further
-- documentation, see http://haskell.org/cabal/users-guide/
name: rarecoal
version: 1.5.1
license: GPL-3
license-file: LICENSE
author: Stephan Schiffels
maintainer: stephan.schiffels@mac.com
category: Bioinformatics
build-type: Simple
cabal-version: >=1.10
library
exposed-modules: RarecoalLib.Core, RarecoalLib.MaxUtils,
RarecoalLib.Utils, RarecoalLib.StateSpace,
RarecoalLib.ModelTemplate, RarecoalLib.Core.Test, RarecoalLib.StateSpace.Test,
RarecoalLib.ModelTemplate.Test, RarecoalLib.Powell
hs-source-dirs: src
build-depends: base, containers, transformers, parallel, foldl, hmatrix-gsl, hmatrix,
pipes-attoparsec, vector, data-memocombinators, tasty, tasty-quickcheck,
parsec, parsec3-numbers, QuickCheck, split, tasty-hunit, sequence-formats, MemoTrie,
deepseq
default-language: Haskell2010
ghc-options: -O
Test-Suite rarecoalTest
type: exitcode-stdio-1.0
main-is: testMain.hs
hs-source-dirs: src-tests
build-depends: base, rarecoal, tasty, vector
default-language: Haskell2010
Benchmark coreBench
type: exitcode-stdio-1.0
main-is: Main.hs
hs-source-dirs: src-bench
build-depends: base, rarecoal, criterion
default-language: Haskell2010
ghc-options: -O -with-rtsopts=-A200m
executable rarecoal
main-is: Main.hs
hs-source-dirs: src-rarecoal
build-depends: base, rarecoal,
transformers,
containers,
parallel,
optparse-applicative,
time,
hmatrix,
hmatrix-gsl,
random,
foldl,
transformers,
monad-loops,
split,
vector,
parsec,
sequence-formats
other-modules: Find, Logl, Maxl, Mcmc, Prob, FitTable, SimCommand, Paths_rarecoal
default-language: Haskell2010
-- extra-lib-dirs: /usr/lib
ghc-options: -threaded -O -with-rtsopts=-A200m