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Sharing indices #26

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luizirber opened this issue Jun 21, 2020 · 0 comments
Open

Sharing indices #26

luizirber opened this issue Jun 21, 2020 · 0 comments

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@luizirber
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  • make it bagit-compatible, similar plans in Make sourmash databases BDBag-compatible? sourmash#991
  • set the fetch.txt file with the URLs for all the signatures, but don't include the full data (it would be more than 2 TB...).
    • It would be pretty cool to have IPFS addresses in fetch.txt...
  • By 'indices' here I mean SBT (without internal nodes, tree structure only) or a Linear index. LCA can be computed locally, tho.
  • Check if building a taxinfo for SRA datasets is viable, and include in the index.
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