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fix: always wait for input files before starting jobs, also upon local execution and within group jobs. This should add further robustness against NFS latency issues. #1486

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merged 3 commits into from Mar 16, 2022

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@johanneskoester johanneskoester commented Mar 16, 2022

Description

Fixes #158.

QC

  • The PR contains a test case for the changes or the changes are already covered by an existing test case.
  • The documentation (docs/) is updated to reflect the changes or this is not necessary (e.g. if the change does neither modify the language nor the behavior or functionalities of Snakemake).

…l execution and within group jobs. This should add further robustness against NFS latency issues.
@johanneskoester johanneskoester removed the request for review from holtgrewe March 16, 2022 09:39
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sonarcloud bot commented Mar 16, 2022

Kudos, SonarCloud Quality Gate passed!    Quality Gate passed

Bug A 0 Bugs
Vulnerability A 0 Vulnerabilities
Security Hotspot A 0 Security Hotspots
Code Smell A 0 Code Smells

No Coverage information No Coverage information
0.0% 0.0% Duplication

@johanneskoester johanneskoester merged commit cab2adb into main Mar 16, 2022
@johanneskoester johanneskoester deleted the fix/wait-pipe branch March 16, 2022 10:37
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pipe fails with multiple output on NFS
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