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fix: Run dependencies with non-existent ancient files earlier #1202

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merged 2 commits into from Oct 21, 2021

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DonFreed
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@DonFreed DonFreed commented Oct 1, 2021

Fixes #946

Description

During DAG creation, ancient() input files are not added to _n_until_ready, regardless of whether the input file exists. This PR adds ancient() input files to _n_until_ready if they do not exist.

QC

  • The PR contains a test case for the changes or the changes are already covered by an existing test case.
  • The documentation (docs/) is updated to reflect the changes or this is not necessary (e.g. if the change does neither modify the language nor the behavior or functionalities of Snakemake).

@DonFreed DonFreed changed the title Run dependencies with non-existent ancient files earlier fix: Run dependencies with non-existent ancient files earlier Oct 1, 2021
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sonarcloud bot commented Oct 21, 2021

Kudos, SonarCloud Quality Gate passed!    Quality Gate passed

Bug A 0 Bugs
Vulnerability A 0 Vulnerabilities
Security Hotspot A 0 Security Hotspots
Code Smell A 0 Code Smells

No Coverage information No Coverage information
0.0% 0.0% Duplication

@johanneskoester johanneskoester merged commit 84d1f64 into snakemake:main Oct 21, 2021
@DonFreed DonFreed deleted the ancient_dag_order branch October 21, 2021 17:38
pvandyken pushed a commit to pvandyken/snakemake that referenced this pull request Nov 15, 2021
…uming job (snakemake#1202)

Fixes snakemake#946

Co-authored-by: Johannes Köster <johannes.koester@uni-due.de>
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Ancient keyword causes incorrect scheduling order
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