From 3e64b5f737b8266f406fb4dc2bd7369501083485 Mon Sep 17 00:00:00 2001 From: "snakedeploy-bot[bot]" <115615832+snakedeploy-bot[bot]@users.noreply.github.com> Date: Tue, 31 Oct 2023 20:18:58 +0000 Subject: [PATCH] perf: autobump bio/benchmark/chm-eval-sample (#1864) Automatic update of bio/benchmark/chm-eval-sample. --------- Co-authored-by: snakedeploy-bot[bot] <115615832+snakedeploy-bot[bot]@users.noreply.github.com> --- .../environment.linux-64.pin.txt | 29 +++++++++++++++++++ .../chm-eval-sample/environment.yaml | 2 +- 2 files changed, 30 insertions(+), 1 deletion(-) create mode 100644 bio/benchmark/chm-eval-sample/environment.linux-64.pin.txt diff --git a/bio/benchmark/chm-eval-sample/environment.linux-64.pin.txt b/bio/benchmark/chm-eval-sample/environment.linux-64.pin.txt new file mode 100644 index 0000000000..56604d6494 --- /dev/null +++ b/bio/benchmark/chm-eval-sample/environment.linux-64.pin.txt @@ -0,0 +1,29 @@ +# This file may be used to create an environment using: +# $ conda create --name --file +# platform: linux-64 +@EXPLICIT +https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2#d7c89558ba9fa0495403155b64376d81 +https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2023.7.22-hbcca054_0.conda#a73ecd2988327ad4c8f2c331482917f2 +https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-13.2.0-h7e041cc_2.conda#9172c297304f2a20134fc56c97fbe229 +https://conda.anaconda.org/conda-forge/linux-64/libgomp-13.2.0-h807b86a_2.conda#e2042154faafe61969556f28bade94b9 +https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-2_gnu.tar.bz2#73aaf86a425cc6e73fcf236a5a46396d +https://conda.anaconda.org/conda-forge/linux-64/libgcc-ng-13.2.0-h807b86a_2.conda#c28003b0be0494f9a7664389146716ff +https://conda.anaconda.org/conda-forge/linux-64/bzip2-1.0.8-h7f98852_4.tar.bz2#a1fd65c7ccbf10880423d82bca54eb54 +https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.20.1-hd590300_1.conda#2facbaf5ee1a56967aecaee89799160e +https://conda.anaconda.org/conda-forge/linux-64/keyutils-1.6.1-h166bdaf_0.tar.bz2#30186d27e2c9fa62b45fb1476b7200e3 +https://conda.anaconda.org/conda-forge/linux-64/libdeflate-1.19-hd590300_0.conda#1635570038840ee3f9c71d22aa5b8b6d +https://conda.anaconda.org/conda-forge/linux-64/libev-4.33-h516909a_1.tar.bz2#6f8720dff19e17ce5d48cfe7f3d2f0a3 +https://conda.anaconda.org/conda-forge/linux-64/libzlib-1.2.13-hd590300_5.conda#f36c115f1ee199da648e0597ec2047ad +https://conda.anaconda.org/conda-forge/linux-64/ncurses-6.4-h59595ed_1.conda#e05410383ad9c39aaa76675a7661db24 +https://conda.anaconda.org/conda-forge/linux-64/openssl-3.1.4-hd590300_0.conda#412ba6938c3e2abaca8b1129ea82e238 +https://conda.anaconda.org/conda-forge/linux-64/xz-5.2.6-h166bdaf_0.tar.bz2#2161070d867d1b1204ea749c8eec4ef0 +https://conda.anaconda.org/conda-forge/linux-64/libedit-3.1.20191231-he28a2e2_2.tar.bz2#4d331e44109e3f0e19b4cb8f9b82f3e1 +https://conda.anaconda.org/conda-forge/linux-64/libnghttp2-1.55.1-h47da74e_0.conda#a802251d1eaeeae041c867faf0f94fa8 +https://conda.anaconda.org/conda-forge/linux-64/libssh2-1.11.0-h0841786_0.conda#1f5a58e686b13bcfde88b93f547d23fe +https://conda.anaconda.org/conda-forge/linux-64/zlib-1.2.13-hd590300_5.conda#68c34ec6149623be41a1933ab996a209 +https://conda.anaconda.org/conda-forge/linux-64/zstd-1.5.5-hfc55251_0.conda#04b88013080254850d6c01ed54810589 +https://conda.anaconda.org/conda-forge/linux-64/krb5-1.21.2-h659d440_0.conda#cd95826dbd331ed1be26bdf401432844 +https://conda.anaconda.org/conda-forge/linux-64/libcurl-8.4.0-hca28451_0.conda#1158ac1d2613b28685644931f11ee807 +https://conda.anaconda.org/conda-forge/linux-64/curl-8.4.0-hca28451_0.conda#2bcf7689cae931dd35d9a45626f49fce +https://conda.anaconda.org/bioconda/linux-64/htslib-1.18-h81da01d_0.tar.bz2#cd4d586516b892e972215153099582db +https://conda.anaconda.org/bioconda/linux-64/samtools-1.18-h50ea8bc_1.tar.bz2#7a53b527d66566e2bd8d436766e9c39e diff --git a/bio/benchmark/chm-eval-sample/environment.yaml b/bio/benchmark/chm-eval-sample/environment.yaml index 228b3ca8a2..8b5db4d274 100644 --- a/bio/benchmark/chm-eval-sample/environment.yaml +++ b/bio/benchmark/chm-eval-sample/environment.yaml @@ -3,5 +3,5 @@ channels: - bioconda - nodefaults dependencies: - - samtools =1.17 + - samtools =1.18 - curl