From 3b186354c11e5fa7f0ceb24d84884c20760c1a97 Mon Sep 17 00:00:00 2001
From: "snakedeploy-bot[bot]"
 <115615832+snakedeploy-bot[bot]@users.noreply.github.com>
Date: Fri, 5 Jan 2024 02:30:58 +0000
Subject: [PATCH] perf: autobump bio/dada2/filter-trim (#2532)

Automatic bump of bio/dada2/filter-trim.

---------

Co-authored-by: snakedeploy-bot[bot] <115615832+snakedeploy-bot[bot]@users.noreply.github.com>
---
 .../filter-trim/environment.linux-64.pin.txt  | 155 +++++++++---------
 bio/dada2/filter-trim/environment.yaml        |   2 +-
 2 files changed, 80 insertions(+), 77 deletions(-)

diff --git a/bio/dada2/filter-trim/environment.linux-64.pin.txt b/bio/dada2/filter-trim/environment.linux-64.pin.txt
index ee9392fdb8..34bfc9782d 100644
--- a/bio/dada2/filter-trim/environment.linux-64.pin.txt
+++ b/bio/dada2/filter-trim/environment.linux-64.pin.txt
@@ -4,27 +4,27 @@
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-https://conda.anaconda.org/bioconda/linux-64/bioconductor-shortread-1.58.0-r43hf17093f_0.tar.bz2#33c8640d3c93b80206e99062a204fc1d
-https://conda.anaconda.org/bioconda/linux-64/bioconductor-dada2-1.28.0-r43hf17093f_0.tar.bz2#d07cfa11771990b90569abb66048b699
+https://conda.anaconda.org/bioconda/noarch/bioconductor-summarizedexperiment-1.32.0-r43hdfd78af_0.tar.bz2#6bed161da6d64cef9f9ebd5fbc2452e7
+https://conda.anaconda.org/bioconda/linux-64/bioconductor-genomicalignments-1.38.0-r43ha9d7317_0.tar.bz2#834db6c5e5fd84eacaa670da2bee8fb9
+https://conda.anaconda.org/bioconda/linux-64/bioconductor-shortread-1.60.0-r43hf17093f_0.tar.bz2#91680982ee2e8b4e47bc585c5716ba9c
+https://conda.anaconda.org/bioconda/linux-64/bioconductor-dada2-1.30.0-r43hf17093f_0.tar.bz2#015ae17c6a0fd86a8d257787b025d01b
diff --git a/bio/dada2/filter-trim/environment.yaml b/bio/dada2/filter-trim/environment.yaml
index f638d64f30..b966cdb6da 100644
--- a/bio/dada2/filter-trim/environment.yaml
+++ b/bio/dada2/filter-trim/environment.yaml
@@ -3,4 +3,4 @@ channels:
   - bioconda
   - nodefaults
 dependencies:
-  - bioconductor-dada2 =1.28.0
+  - bioconductor-dada2 =1.30.0