From 4846fc8988a84a2eef02652a5b1ac44ad97bcb4b Mon Sep 17 00:00:00 2001 From: Simon Kallfass Date: Sun, 24 Nov 2019 14:24:58 +0100 Subject: [PATCH] cenv-settings for project are extracted now from "extra:cenv"-section. --- README.rst | 15 +- cenv_tool/project.py | 2 +- cenv_tool/schemata.py | 19 +- cenv_tool/utils.py | 6 +- docs/_static/coverage.svg | 4 +- docs/index.rst | 4 +- docs/usage.rst | 17 +- poetry.lock | 547 +++++++++++++++--- pyproject.toml | 2 +- .../invalid_testproject/conda-build/meta.yaml | 9 +- tests/testproject/conda-build/meta.yaml | 9 +- tests/utils_test.py | 8 +- 12 files changed, 522 insertions(+), 120 deletions(-) diff --git a/README.rst b/README.rst index 01d812c..58307b6 100644 --- a/README.rst +++ b/README.rst @@ -45,8 +45,8 @@ for the conda-environment during development and for production), ``cenv`` the only relevant file and to create and update conda-environment from the definition inside this ``meta.yaml``. The name of the conda-environment to create / update is defined in the section -``extra`` and the variable ``env_name`` inside the ``meta.yaml``. -The python version must be defined in ``extra`` inside the key ``python``. +``extra:cenv`` and the variable ``env_name`` inside the ``meta.yaml``. +The python version must be defined in ``extra:cenv`` inside the key ``python``. The steps run by cenv: @@ -160,7 +160,7 @@ The required information about the projects conda environment are extracted from the meta.yaml. This meta.yaml should be located inside the project folder at ``./conda-build/meta.yaml``. -The project-configuration is defined in the ``extra`` section of the +The project-configuration is defined in the ``extra:cenv`` section of the ``meta.yaml``. There you can define the name of the projects conda-environment at ``env_name``. @@ -208,10 +208,11 @@ A meta.yaml valid for cenv should look like the following: - example_package extra: - env_name: example - python: 3.6 - dev_requirements: - - ipython >=7.2.0 + cenv: + env_name: example + python: 3.6 + dev_requirements: + - ipython >=7.2.0 **ATTENTION**\ : diff --git a/cenv_tool/project.py b/cenv_tool/project.py index 23dd38d..9975440 100644 --- a/cenv_tool/project.py +++ b/cenv_tool/project.py @@ -68,7 +68,7 @@ def __attrs_post_init__(self): except FileNotFoundError: message(text='project has no meta.yaml!', color='red') exit(1) - settings = meta_yaml['extra'] + settings = meta_yaml['extra']['cenv'] dependencies = extract_dependencies_from_meta_yaml(meta_yaml) config = read_config() diff --git a/cenv_tool/schemata.py b/cenv_tool/schemata.py index 3c70ddd..f0447c0 100644 --- a/cenv_tool/schemata.py +++ b/cenv_tool/schemata.py @@ -88,14 +88,7 @@ class SNTest(Schema): ) -class SNExtra(Schema): - """Contain the ``extra``-section inside a ``meta.yaml``. - - The ``extra``-section has to contains the information where to find the - conda-folder, the name of the conda environment to use for the current - project and the cenv-version used when the ``meta.yaml`` file was created. - """ - +class SNCenv(Schema): env_name = fields.String( strict=True, required=True, @@ -119,6 +112,16 @@ class SNExtra(Schema): ) +class SNExtra(Schema): + """Contain the ``extra``-section inside a ``meta.yaml``. + + The ``extra``-section has to contains the information where to find the + conda-folder, the name of the conda environment to use for the current + project and the cenv-version used when the ``meta.yaml`` file was created. + """ + cenv = fields.Nested(SNCenv, strict=True, required=True) + + class SMetaYaml(Schema): """Contain the representable of a complete ``meta.yaml`` file. diff --git a/cenv_tool/utils.py b/cenv_tool/utils.py index 8207f24..c5f3e1b 100644 --- a/cenv_tool/utils.py +++ b/cenv_tool/utils.py @@ -138,11 +138,11 @@ def extract_dependencies_from_meta_yaml(meta_yaml_content: dict) -> List[str]: meta_yaml_content['requirements']['run_constrained'] ) - if meta_yaml_content['extra'].get('dev_requirements'): - dependencies.extend(meta_yaml_content['extra']['dev_requirements']) + if meta_yaml_content['extra']['cenv'].get('dev_requirements'): + dependencies.extend(meta_yaml_content['extra']['cenv']['dev_requirements']) # append the python version to use in the conda environment - dependencies.append(f'python {meta_yaml_content["extra"]["python"]}') + dependencies.append(f'python {meta_yaml_content["extra"]["cenv"]["python"]}') return dependencies diff --git a/docs/_static/coverage.svg b/docs/_static/coverage.svg index 5b40c8f..4b105c6 100644 --- a/docs/_static/coverage.svg +++ b/docs/_static/coverage.svg @@ -15,7 +15,7 @@ coverage coverage - 83% - 83% + 82% + 82% diff --git a/docs/index.rst b/docs/index.rst index 06049cd..7043277 100644 --- a/docs/index.rst +++ b/docs/index.rst @@ -25,9 +25,9 @@ for the conda-environment during development and for production), ``cenv`` the only relevant file and to create and update conda-environment from the definition inside this ``meta.yaml``. The name of the conda-environment to create / update is defined in the section -``extra`` and the variable ``env_name`` inside the ``meta.yaml`` (at +``extra:cenv`` and the variable ``env_name`` inside the ``meta.yaml`` (at ``conda-build/meta.yaml``). -The python version must be defined in ``extra`` inside the key ``python``. +The python version must be defined in ``extra:cenv`` inside the key ``python``. The steps run by cenv: diff --git a/docs/usage.rst b/docs/usage.rst index 20b23b5..8cdc449 100644 --- a/docs/usage.rst +++ b/docs/usage.rst @@ -48,12 +48,12 @@ This meta.yaml should be located inside the project folder at The project-configuration is defined in the ``extra`` section of the ``meta.yaml``. There you can define the name of the projects conda-environment at -``extra:env_name``. -The python version has to be defined here at ``extra:python``, too. +``extra:cenv:env_name``. +The python version has to be defined here at ``extra:cenv:python``, too. Also you can define requirements only needed during development but not to be included into the resulting conda package. These requirements have to be defined in the -``extra:dev_requirements``-section. +``extra:cenv:dev_requirements``-section. All other parts of the ``meta.yaml`` have to be defined as default. @@ -94,10 +94,11 @@ A meta.yaml valid for cenv should look like the following: - example_package extra: - env_name: example - python: 3.6.8 - dev_requirements: - - ipython >=7 + cenv: + env_name: example + python: 3.6.8 + dev_requirements: + - ipython >=7 .. attention:: @@ -108,7 +109,7 @@ A meta.yaml valid for cenv should look like the following: - package >=0.1 - The same is required for the ``extra:dev_requirements``-section. + The same is required for the ``extra:cenv:dev_requirements``-section. If the section ``requirements:run_constrained`` is defined, too, these dependency information is extracted for dependency collection, too. Not defining a version will not create or update a conda-environment, diff --git a/poetry.lock b/poetry.lock index 66b7da5..6aae702 100644 --- a/poetry.lock +++ b/poetry.lock @@ -21,11 +21,11 @@ description = "An abstract syntax tree for Python with inference support." name = "astroid" optional = false python-versions = ">=3.5.*" -version = "2.3.2" +version = "2.3.3" [package.dependencies] lazy-object-proxy = ">=1.4.0,<1.5.0" -six = "1.12" +six = ">=1.12,<2.0" wrapt = ">=1.11.0,<1.12.0" [package.dependencies.typed-ast] @@ -35,6 +35,7 @@ version = ">=1.4.0,<1.5" [[package]] category = "dev" description = "Atomic file writes." +marker = "sys_platform == \"win32\"" name = "atomicwrites" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" @@ -48,6 +49,12 @@ optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" version = "19.3.0" +[package.extras] +azure-pipelines = ["coverage", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "zope.interface", "pytest-azurepipelines"] +dev = ["coverage", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "zope.interface", "sphinx", "pre-commit"] +docs = ["sphinx", "zope.interface"] +tests = ["coverage", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "zope.interface"] + [[package]] category = "dev" description = "Internationalization utilities" @@ -110,11 +117,11 @@ version = "1.0.1" [[package]] category = "dev" -description = "Better living through Python with decorators" +description = "Decorators for Humans" name = "decorator" optional = false python-versions = ">=2.6, !=3.0.*, !=3.1.*" -version = "4.4.0" +version = "4.4.1" [[package]] category = "dev" @@ -152,13 +159,17 @@ version = "0.23" [package.dependencies] zipp = ">=0.5" +[package.extras] +docs = ["sphinx", "rst.linker"] +testing = ["packaging", "importlib-resources"] + [[package]] category = "dev" description = "IPython: Productive Interactive Computing" name = "ipython" optional = false python-versions = ">=3.5" -version = "7.8.0" +version = "7.9.0" [package.dependencies] appnope = "*" @@ -173,6 +184,17 @@ pygments = "*" setuptools = ">=18.5" traitlets = ">=4.2" +[package.extras] +all = ["testpath", "nbformat", "numpy", "notebook", "ipyparallel", "nbconvert", "ipywidgets", "pygments", "requests", "nose (>=0.10.1)", "qtconsole", "ipykernel", "Sphinx (>=1.3)"] +doc = ["Sphinx (>=1.3)"] +kernel = ["ipykernel"] +nbconvert = ["nbconvert"] +nbformat = ["nbformat"] +notebook = ["notebook", "ipywidgets"] +parallel = ["ipyparallel"] +qtconsole = ["qtconsole"] +test = ["nose (>=0.10.1)", "requests", "testpath", "pygments", "nbformat", "ipykernel", "numpy"] + [[package]] category = "dev" description = "Vestigial utilities from IPython" @@ -189,6 +211,12 @@ optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" version = "4.3.21" +[package.extras] +pipfile = ["pipreqs", "requirementslib"] +pyproject = ["toml"] +requirements = ["pipreqs", "pip-api"] +xdg_home = ["appdirs (>=1.4.0)"] + [[package]] category = "dev" description = "An autocompletion tool for Python that can be used for text editors." @@ -200,6 +228,9 @@ version = "0.15.1" [package.dependencies] parso = ">=0.5.0" +[package.extras] +testing = ["colorama", "docopt", "pytest (>=3.1.0,<5.0.0)"] + [[package]] category = "main" description = "A very fast and expressive template engine." @@ -211,13 +242,16 @@ version = "2.10.3" [package.dependencies] MarkupSafe = ">=0.23" +[package.extras] +i18n = ["Babel (>=0.8)"] + [[package]] category = "dev" description = "A fast and thorough lazy object proxy." name = "lazy-object-proxy" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "1.4.2" +version = "1.4.3" [[package]] category = "main" @@ -235,6 +269,13 @@ optional = false python-versions = "*" version = "2.20.5" +[package.extras] +dev = ["python-dateutil", "simplejson", "pytest", "pytz", "flake8 (3.7.4)", "tox"] +docs = ["sphinx (2.1.2)", "sphinx-issues (1.2.0)", "alabaster (0.7.12)", "sphinx-version-warning (1.1.2)"] +lint = ["flake8 (3.7.4)"] +reco = ["python-dateutil", "simplejson"] +tests = ["pytest", "pytz"] + [[package]] category = "dev" description = "McCabe checker, plugin for flake8" @@ -271,6 +312,9 @@ optional = false python-versions = "*" version = "0.5.1" +[package.extras] +testing = ["docopt", "pytest (>=3.0.7)"] + [[package]] category = "dev" description = "Pexpect allows easy control of interactive console applications." @@ -297,13 +341,16 @@ description = "plugin and hook calling mechanisms for python" name = "pluggy" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "0.13.0" +version = "0.13.1" [package.dependencies] [package.dependencies.importlib-metadata] python = "<3.8" version = ">=0.12" +[package.extras] +dev = ["pre-commit", "tox"] + [[package]] category = "dev" description = "Library for building powerful interactive command lines in Python" @@ -347,7 +394,7 @@ description = "python code static checker" name = "pylint" optional = false python-versions = ">=3.5.*" -version = "2.4.3" +version = "2.4.4" [package.dependencies] astroid = ">=2.3.0,<2.4" @@ -361,7 +408,7 @@ description = "Python parsing module" name = "pyparsing" optional = false python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*" -version = "2.4.2" +version = "2.4.5" [[package]] category = "dev" @@ -369,7 +416,7 @@ description = "pytest: simple powerful testing with Python" name = "pytest" optional = false python-versions = ">=3.5" -version = "5.2.1" +version = "5.3.0" [package.dependencies] atomicwrites = ">=1.0" @@ -385,6 +432,9 @@ wcwidth = "*" python = "<3.8" version = ">=0.12" +[package.extras] +testing = ["argcomplete", "hypothesis (>=3.56)", "mock", "nose", "requests", "xmlschema"] + [[package]] category = "dev" description = "Pytest plugin for measuring coverage." @@ -397,6 +447,9 @@ version = "2.8.1" coverage = ">=4.4" pytest = ">=3.6" +[package.extras] +testing = ["fields", "hunter", "process-tests (2.0.2)", "six", "virtualenv"] + [[package]] category = "dev" description = "py.test plugin to create a 'tmpdir' containing predefined files/directories." @@ -422,7 +475,7 @@ category = "main" description = "YAML parser and emitter for Python" name = "pyyaml" optional = false -python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" +python-versions = "*" version = "5.1.2" [[package]] @@ -439,13 +492,17 @@ chardet = ">=3.0.2,<3.1.0" idna = ">=2.5,<2.9" urllib3 = ">=1.21.1,<1.25.0 || >1.25.0,<1.25.1 || >1.25.1,<1.26" +[package.extras] +security = ["pyOpenSSL (>=0.14)", "cryptography (>=1.3.4)", "idna (>=2.0.0)"] +socks = ["PySocks (>=1.5.6,<1.5.7 || >1.5.7)", "win-inet-pton"] + [[package]] category = "main" description = "Python 2 and 3 compatibility utilities" name = "six" optional = false python-versions = ">=2.6, !=3.0.*, !=3.1.*" -version = "1.12.0" +version = "1.13.0" [[package]] category = "dev" @@ -461,7 +518,7 @@ description = "Python documentation generator" name = "sphinx" optional = false python-versions = ">=3.5" -version = "2.2.0" +version = "2.2.1" [package.dependencies] Jinja2 = ">=2.3" @@ -482,17 +539,25 @@ sphinxcontrib-jsmath = "*" sphinxcontrib-qthelp = "*" sphinxcontrib-serializinghtml = "*" +[package.extras] +docs = ["sphinxcontrib-websupport"] +test = ["pytest", "pytest-cov", "html5lib", "flake8 (>=3.5.0)", "flake8-import-order", "mypy (>=0.740)", "docutils-stubs"] + [[package]] category = "dev" description = "Type hints (PEP 484) support for the Sphinx autodoc extension" name = "sphinx-autodoc-typehints" optional = false python-versions = ">=3.5.2" -version = "1.8.0" +version = "1.10.3" [package.dependencies] Sphinx = ">=2.1" +[package.extras] +test = ["pytest (>=3.1.0)", "typing-extensions (>=3.5)", "sphobjinv (>=2.0)", "dataclasses"] +type_comments = ["typed-ast (>=1.4.0)"] + [[package]] category = "dev" description = "Read the Docs theme for Sphinx" @@ -512,6 +577,9 @@ optional = false python-versions = "*" version = "1.0.1" +[package.extras] +test = ["pytest", "flake8", "mypy"] + [[package]] category = "dev" description = "" @@ -520,6 +588,9 @@ optional = false python-versions = "*" version = "1.0.1" +[package.extras] +test = ["pytest", "flake8", "mypy"] + [[package]] category = "dev" description = "" @@ -528,6 +599,9 @@ optional = false python-versions = "*" version = "1.0.2" +[package.extras] +test = ["pytest", "flake8", "mypy", "html5lib"] + [[package]] category = "dev" description = "A sphinx extension which renders display math in HTML via JavaScript" @@ -536,6 +610,9 @@ optional = false python-versions = ">=3.5" version = "1.0.1" +[package.extras] +test = ["pytest", "flake8", "mypy"] + [[package]] category = "dev" description = "" @@ -544,6 +621,9 @@ optional = false python-versions = "*" version = "1.0.2" +[package.extras] +test = ["pytest", "flake8", "mypy"] + [[package]] category = "dev" description = "" @@ -552,6 +632,9 @@ optional = false python-versions = "*" version = "1.1.3" +[package.extras] +test = ["pytest", "flake8", "mypy"] + [[package]] category = "dev" description = "Traitlets Python config system" @@ -565,6 +648,9 @@ decorator = "*" ipython-genutils = "*" six = "*" +[package.extras] +test = ["pytest", "mock"] + [[package]] category = "dev" description = "a fork of Python 2 and 3 ast modules with type comment support" @@ -582,6 +668,10 @@ optional = false python-versions = "*" version = "1.22" +[package.extras] +secure = ["pyOpenSSL (>=0.14)", "cryptography (>=1.3.4)", "idna (>=2.0.0)", "certifi", "ipaddress"] +socks = ["PySocks (>=1.5.6,<1.5.7 || >1.5.7,<2.0)"] + [[package]] category = "dev" description = "Measures number of Terminal column cells of wide-character codes" @@ -618,6 +708,10 @@ version = "0.6.0" [package.dependencies] more-itertools = "*" +[package.extras] +docs = ["sphinx", "jaraco.packaging (>=3.2)", "rst.linker (>=1.9)"] +testing = ["pathlib2", "contextlib2", "unittest2"] + [extras] docs = [] tests = [] @@ -626,66 +720,365 @@ tests = [] content-hash = "4e1befcd49dcc1ccc1e38a51bdc00f6af3c820bf82b9f57883e173f147e42dc9" python-versions = ">=3.7" -[metadata.hashes] -alabaster = ["446438bdcca0e05bd45ea2de1668c1d9b032e1a9154c2c259092d77031ddd359", "a661d72d58e6ea8a57f7a86e37d86716863ee5e92788398526d58b26a4e4dc02"] -appnope = ["5b26757dc6f79a3b7dc9fab95359328d5747fcb2409d331ea66d0272b90ab2a0", "8b995ffe925347a2138d7ac0fe77155e4311a0ea6d6da4f5128fe4b3cbe5ed71"] -astroid = ["09a3fba616519311f1af8a461f804b68f0370e100c9264a035aa7846d7852e33", "5a79c9b4bd6c4be777424593f957c996e20beb5f74e0bc332f47713c6f675efe"] -atomicwrites = ["03472c30eb2c5d1ba9227e4c2ca66ab8287fbfbbda3888aa93dc2e28fc6811b4", "75a9445bac02d8d058d5e1fe689654ba5a6556a1dfd8ce6ec55a0ed79866cfa6"] -attrs = ["08a96c641c3a74e44eb59afb61a24f2cb9f4d7188748e76ba4bb5edfa3cb7d1c", "f7b7ce16570fe9965acd6d30101a28f62fb4a7f9e926b3bbc9b61f8b04247e72"] -babel = ["af92e6106cb7c55286b25b38ad7695f8b4efb36a90ba483d7f7a6628c46158ab", "e86135ae101e31e2c8ec20a4e0c5220f4eed12487d5cf3f78be7e98d3a57fc28"] -backcall = ["38ecd85be2c1e78f77fd91700c76e14667dc21e2713b63876c0eb901196e01e4", "bbbf4b1e5cd2bdb08f915895b51081c041bac22394fdfcfdfbe9f14b77c08bf2"] -certifi = ["e4f3620cfea4f83eedc95b24abd9cd56f3c4b146dd0177e83a21b4eb49e21e50", "fd7c7c74727ddcf00e9acd26bba8da604ffec95bf1c2144e67aff7a8b50e6cef"] -chardet = ["84ab92ed1c4d4f16916e05906b6b75a6c0fb5db821cc65e70cbd64a3e2a5eaae", "fc323ffcaeaed0e0a02bf4d117757b98aed530d9ed4531e3e15460124c106691"] -colorama = ["05eed71e2e327246ad6b38c540c4a3117230b19679b875190486ddd2d721422d", "f8ac84de7840f5b9c4e3347b3c1eaa50f7e49c2b07596221daec5edaabbd7c48"] -coverage = ["007eeef7e23f9473622f7d94a3e029a45d55a92a1f083f0f3512f5ab9a669b05", "0388c12539372bb92d6dde68b4627f0300d948965bbb7fc104924d715fdc0965", "079248312838c4c8f3494934ab7382a42d42d5f365f0cf7516f938dbb3f53f3f", "17307429935f96c986a1b1674f78079528833410750321d22b5fb35d1883828e", 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a/tests/invalid_testproject/conda-build/meta.yaml b/tests/invalid_testproject/conda-build/meta.yaml index dc634d0..ee43cb6 100644 --- a/tests/invalid_testproject/conda-build/meta.yaml +++ b/tests/invalid_testproject/conda-build/meta.yaml @@ -37,7 +37,8 @@ test: - testproject -v extra: - dev_requirements: - - ipython >=7.2.0 - - mkdocs >=1.0.4 - - pylint >=2.2.2 + cenv: + dev_requirements: + - ipython >=7.2.0 + - mkdocs >=1.0.4 + - pylint >=2.2.2 diff --git a/tests/testproject/conda-build/meta.yaml b/tests/testproject/conda-build/meta.yaml index fe6adc9..7093fc9 100644 --- a/tests/testproject/conda-build/meta.yaml +++ b/tests/testproject/conda-build/meta.yaml @@ -36,7 +36,8 @@ test: - cenv_testing_project0001 -v extra: - env_name: "cenv_testing_project0001" - python: 3.7.3 - dev_requirements: - - pylint >=2.2.2 + cenv: + env_name: "cenv_testing_project0001" + python: 3.7.3 + dev_requirements: + - pylint >=2.2.2 diff --git a/tests/utils_test.py b/tests/utils_test.py index 261339f..506955b 100644 --- a/tests/utils_test.py +++ b/tests/utils_test.py @@ -30,9 +30,11 @@ 'run_constrained': ['pandas >=0.23'] }, 'extra': { - 'dev_requirements': ['pylint >=2.2.2'], - 'python': '3.7.3', - 'env_name': 'cenv_testing_project0001', + 'cenv': { + 'dev_requirements': ['pylint >=2.2.2'], + 'python': '3.7.3', + 'env_name': 'cenv_testing_project0001', + } }, 'source': { 'path': '..',