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Export of Tanimoto similarity to structure_candidates.tsv #95

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JethroHemmann opened this issue Dec 20, 2022 · 2 comments
Open

Export of Tanimoto similarity to structure_candidates.tsv #95

JethroHemmann opened this issue Dec 20, 2022 · 2 comments

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@JethroHemmann
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Hi,

I was wondering if there is a way to access the Tanimoto similarity score (xx%), which is shown below the structures in SIRIUS, after exporting the project/summaries?

In the structure_candidates.tsv I could not find the information.

@mfleisch
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mfleisch commented Jan 9, 2023

The tanimoto similarity is currently not part of the summary tables but it is part of the fingerprint results in the project directory (project-space). You can find them under <PROJECT>/<COMPOUND_DIR>/fingerid/<FOMRULA_CANDIDATE.tsv>.
The fingerid file is just a zip Archive that can be unpacked to access the files inside.

@JethroHemmann
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Thanks, that´s good to know!

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