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must use --reload to re-run samples that whose runs have failed for some reason.
Proposed solution
--reload should still 'rerun' a sample but you could check for existence of sample_alt_id joined with the abundance table and not require reload to 'rerun' these.
This could enable batching of sample runs and without the risk of re analyzing data.
select sample_alt_id from abundances join samples on abundances.sample_id =
samples.sample_id and sample_alt_id = $sample;
The text was updated successfully, but these errors were encountered:
Problem
must use --reload to re-run samples that whose runs have failed for some reason.
Proposed solution
--reload should still 'rerun' a sample but you could check for existence of sample_alt_id joined with the abundance table and not require reload to 'rerun' these.
This could enable batching of sample runs and without the risk of re analyzing data.
The text was updated successfully, but these errors were encountered: