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Tower request field tasks.script exceeds expected size #349

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Z-Zen opened this issue Mar 30, 2022 · 5 comments
Open

Tower request field tasks.script exceeds expected size #349

Z-Zen opened this issue Mar 30, 2022 · 5 comments

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@Z-Zen
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Z-Zen commented Mar 30, 2022

Hello,

I am running Nextflow Tower on our server and the pipeline gave away the error Tower request field 'tasks.script' exceeds expected size. Does it seem that Tower could not store the whole script block in the database? if that's the case, what parameter should be changed to resolve this issue?

Thanks in advance.

@pditommaso
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The only workaround is to make the script smaller. Putting into a separate Bash is an easy solution

@BrunoGrandePhD
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@pditommaso: This appears as a warning rather than an error. What's the potential consequence?

@pditommaso
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The only side effect is that the task script stored into tower is not complete

@rcannood
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rcannood commented Oct 4, 2022

Hello all!

Would it be possible not to print the entire script when this warning message occurs? The warning message exceeds the expected size :)

@tverbeiren
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tverbeiren commented Jan 16, 2023

@pditommaso I'm with @rcannood on this one. A warning and a pointer to the process/script should suffice, no?

The current warning makes it so much harder to interpret console output during a pipeline run.

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5 participants