All notable changes to this project will be documented in this file.
The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.
- Saving shapes and points with
Shift + E
now saves 2D data (a z dim was wrongly added)
- Multi table support #199 @melonora
- Color shapes and points by values in dataframe in addition to tables #216
- Avoid exception when registering shortcuts #201 @aeisenbarth
- Fix wrong point size when affine specified #193
- Wrong element visiblity when changing coordinate system #207
- Cleaned up data model #180
- Fixes correct matching of geometies and annoations via join #208
- Better docstrings #219
- removed npe (napari plugin engine) dependency
- New APIs for changing coordinate systems #169
- New APIs for adding single elements #170
- Improved code to link new layers to layers with a
SpatialData
object #173
- Enabled saving annotations #168
- Added safeguard when table is None #177 @aeisenbarth
- Fix plotting annotations when changing element #175
- Fixed installation requirements #185 @goanpeca
- Global parameters POINT_THRESHOLD and POLYGON_THRESHOLD added to allow users to adjust these parameters.
- Updated dependencies
- Updated installation instructions since napari conda-forge no longer installs Qt backend. @psobolewskiPhD
- Allow for viewing SpatialData object with no annotations. @aeisenbarth
- Multiple SpatialData objects support (ported from the "spatialdata" branch)
- Interactive is more ergonomic, has a headless parameter, can be used to display pre-configured elements
- Remembering user layer visibility settings when changing coordinate system
- Fixes in CLI
- Several internal bugfixes and code refactorings
- Fixes in updating affine transformation when changing coordinate system
- Wrong tag preventing the release to pip (the previous tag was not of a commit merged to main).
- CLI @berombau @LucaMarconato
- Display of points and circles @LucaMarconato
- Issue with name reinitialization @tothmarcella
- Reverted to use PyQt5 @melonora
- RGB/RGBA correctly displayed for 3/4 channel images @rahulbshrestha
- Layer visibility changes when changing coordinate system @melonora
- Performance with multiscale images @LucaMarconato
- Refactored internal code to prepare for future refactoring @melonora
- Reviewers @giovp @timtreis @kevinyamauchi and the users that reported bugs.
- Color circles and polygons with annotations (#73)
- Shapes support
- Package versioning (#63)
- Merge pull request #62 from scverse/kevinyamauchi-patch-1 - Install spatialdata from pypi