/
CarrickRoads.conf
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CarrickRoads.conf
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# OceanFlux Greenhouse Gases default climatology configuration file
# created 27/07/2016 Jamie Shutler, j.d.shutler@exeter.ac.uk
# last updated 21/05/2019 Tom Holding, t.m.holding@exeter.ac.uk
#
# This file contains the run configuration options for FluxEngine, including:
# Input datasets, filepaths and identifiers, gas transfer velocity parameterisation, flux calculation selection and other options
# All settings are defined following the "option_name = option_value" format. Comments are prefixed using '#'
# Flux calculation options. Valid options are 'bulk', 'rapid' or 'equilibrium'
# 'rapid' and 'equilibrium' are in relation to the flux model as described in
# Woolf et al., 2012.
flux_calc = rapid
# If sst_gradients enabled and only one of sstskin or sstfnd is used the other
# will be derived according to, i.e.:
# sstskin = sstfnd - cool_skin_difference
# Default value for cool_skin_difference is 0.17K (Donlon et al., 2002)
sst_gradients = yes
cool_skin_difference = 0.17
saline_skin_value = 0.1
# Latitude, longitude and time product names (these are taken from the data layer names in
# axes_data_layer, which must contain the name of datalayer defined below, e.g. 'sstskin').
# Typically 'lat' and 'lon' unless using Takahashi which is 'latitude' and 'longitude'.
axes_data_layer = sstfnd
latitude_prod = latitude
longitude_prod = longitude
time_prod = time
#temporal_resolution = 30 00:00
# Selected gas transfer velocity (k) parameterisation. Options include:
# k_Ho2006, k_Nightingale2000, kt_OceanFluxGHG, k_Wanninkhof1992, k_Wanninkhof2014,
# k_McGillis2001, k_Ho1997, kd_OceanFluxGHG_backscatter, kd_OceanFluxGHG_wind,
# kb_OceanFluxGHG, kt_OceanFluxGHG_kd_wind, k_generic
k_parameterisation = k_Wanninkhof2014
#
# Output directory for the resultant netcdf files
#
output_dir = fe_output/carrickroads/
output_file = carrickroads_fe.nc
##############################################################
# Input data layers and their associated data variable names #
##############################################################
# Required input data layers are:
# * windu10
# * sstskin and/or sstfnd
# * pco2_sw
# * vco2_air or pco2_air
#
# Additionally ice coveraged is required if using the ghgflux-budgets tool to calculate integrated net flux.
#
# Issues to note:
# - All entries are case sensitive
# - Additional options can be set and will be automatically available in FluxEngine (e.g. for use with custom gas transfer velocity parameterisations)
#
# Filepaths can contain the following tokens to allow different data to be selected for different time steps:
# <YYYY> - converted to 4 digit year, e.g. 1999
# <YY> - converted to 2 digit year, e.g. 99
# <MM> - converted to two digit month, e.g. 01 for January
# <Mmm> - converted to three letter month abbreviation, e.g. Jan for January
# <MMM> - uppercase three letter month abbreviation, e.g. JAN
# <mmm> - lowercase three letter month abbreviation, e.g. jan
# <DD> - two digit decimal representation of the day of the month, e.g. 01 for the 1st day of the month
# <DDD> - three digit decimal representation of the day of the year, e.g. 123 for 3rd May (124 on a leap year)
#
# In addition to these tokens, filename patterns can be specified using ? and * which
# follow the standard Unix glob behaviour.
#
# Each input data layer requires at least a file path (to the .nc file, set using datalayername_path) and a 'product'
# name (to the variable within the .nc file, set using datalayername_prod) is the name of the data set within the netCDF file. This can be checked using 'ncdump -h <file.nc> | less'
# 'analysed_sst_mean'
# To specify an input data layer you must define a minimum of its filepath (using datalayername_path) and its 'product' name (datalayername_prod).
#The product name is the variable name within the netCDF (.nc) file. E.g.:
# sstskin_path = path/to/data.nc
# sstskin_prod = sst_skin_mean
#
# Other suffixes can be used.
# _path - Filepath to the netCDF (.nc) file containing this data.
# May be relative or absolute and can contain the tokens described above.
# _prod - The name of the variable within the netCDF file.
# _stddev_prod - Optional. Name of the variable containing standard deviation data.
# _count_prod - Optional. Name of the variable containing count data.
# _netCDFName - Optional. Override the name which will be given to the data layer in the
# - output netCDF file.
# _minBound - Optional. Override the minimum allowed value.
# _maxBound - Optional. Override the maximum allowed value.
# _preprocessing - Optional. A list of functions used to transform the data before it is used.
# - Functions should be seperated by commas and are applied in order.
# - Functions must be defined in src_home/data_preprocessing.py
#
# sst skin data inputs
sstfnd_path = CarrickRoads.nc
sstfnd_prod = ESA_SST_mean
# sst at pco2 recording
pco2_sst_path = CarrickRoads.nc
pco2_sst_prod = SST_C_mean
# U10 wind data inputs
windu10_path = CarrickRoads.nc
windu10_prod = windspeed_mean
windu10_moment2_path = CarrickRoads.nc
windu10_moment2_prod = wind_moment2_mean
#windu10_moment3_path = CarrickRoads.nc
#windu10_moment3_prod = wind_moment3_mean
# modelled air pressure data.
pressure_path = CarrickRoads.nc
pressure_prod = air_pressure_mean
# Salinity data
salinity_path = CarrickRoads.nc
salinity_prod = salinity_mean
#atmospheric and ocean CO2 data
vgas_air_path = CarrickRoads.nc
vgas_air_prod = xCO2air_mean
pgas_sw_path = CarrickRoads.nc
pgas_sw_prod = fCO2_mean