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SeuratObject v5.0.2

Test environments

  • local ubuntu 20.04 install, R 4.3.2
  • local macOS 14.1, R 4.4.0
  • win-builder (oldrelease, release, devel)
  • mac-builder (devel)

We were unable to test on r-release on mac-builder because the portal seemed to point to the wrong version.

R CMD check results

There were no ERRORs or WARNINGs

There were two NOTEs

New maintainer: Rahul Satija seurat@nygenome.org Old maintainer(s): Paul Hoffman seurat@nygenome.org Suggests or Enhances not in mainstream repositories: BPCells Availability using Additional_repositories specification: BPCells yes https://bnprks.r-universe.dev

The new maintainer is Rahul Satija, the email address has remained the same.

  • checking package dependencies ... NOTE Package suggested but not available for checking: 'BPCells'

BPCells is hosted on R-universe and used conditionally in SeuratObject.

Downstream dependencies

There are 2 packages that depend on SeuratObject: Seurat, and tidyseurat; this update does not impact their functionality.

There are 9 packages that import SeuratObject: APackOfTheClones, bbknnR, CAMML, Platypus, scAnnotate, scaper, scCustomize, scpoisson, and Signac; this update does not impact their functionality.

There are 10 packages that suggest SeuratObject: cellpypes, CytoSimplex, RESET, rliger, scOntoMatch, SCpubr, singleCellHaystack, SpaTopic, SPECK, and VAM; this update does not impact their functionality.