{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":286326001,"defaultBranch":"master","name":"seurat-object","ownerLogin":"satijalab","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2020-08-09T22:21:20.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/8411851?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1715817285.0","currentOid":""},"activityList":{"items":[{"before":null,"after":"09aa817db3cf2779f9e5e982ee8686797d2075e5","ref":"refs/heads/fix/save-seurat-split","pushedAt":"2024-05-15T23:54:45.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"mojaveazure","name":"Paul Hoffman","path":"/mojaveazure","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11035068?s=80&v=4"},"commit":{"message":"Move on-disk layers path-by-path rather than layer-by-layer\nIt's possible for multiple layers to work off of the same disk-backed\nobjects; in these cases, moving one layer causes moving the other layers\nto fail as their disk-backed representation no longer exists. This PR\nadjusts `SaveSeuratRds()` to move on-disk layers path-by-path rather\nthan layer-by-layer","shortMessageHtmlLink":"Move on-disk layers path-by-path rather than layer-by-layer"}},{"before":"5dc57045dc70eec31b0700db7a12c26bfa780186","after":"04ee982d64c30a4e68bca1f87cedc331ec418c68","ref":"refs/heads/gh-pages","pushedAt":"2024-05-08T16:17:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deploying to gh-pages from @ satijalab/seurat-object@58bf437fe058dd78913d9ef7b48008a3e24a306a ๐Ÿš€","shortMessageHtmlLink":"Deploying to gh-pages from @ 58bf437 ๐Ÿš€"}},{"before":"6d3c4f7e67eb3ca0c2c505ab9528c7ecb7afd3a7","after":"5dc57045dc70eec31b0700db7a12c26bfa780186","ref":"refs/heads/gh-pages","pushedAt":"2024-05-08T16:14:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deploying to gh-pages from @ satijalab/seurat-object@58bf437fe058dd78913d9ef7b48008a3e24a306a ๐Ÿš€","shortMessageHtmlLink":"Deploying to gh-pages from @ 58bf437 ๐Ÿš€"}},{"before":"ddd6100e9b25f425e6fc183d0206ba508541039c","after":"58bf437fe058dd78913d9ef7b48008a3e24a306a","ref":"refs/heads/develop","pushedAt":"2024-05-08T16:04:57.000Z","pushType":"push","commitsCount":8,"pusher":{"login":"dcollins15","name":"David Collins","path":"/dcollins15","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23369610?s=80&v=4"},"commit":{"message":"Merge pull request #205 from satijalab/release/5.0.2\n\nRelease/5.0.2","shortMessageHtmlLink":"Merge pull request #205 from satijalab/release/5.0.2"}},{"before":"4d3739bbdb8b801f9adbe542ad179d7dec61cafc","after":"58bf437fe058dd78913d9ef7b48008a3e24a306a","ref":"refs/heads/master","pushedAt":"2024-05-08T15:58:47.000Z","pushType":"pr_merge","commitsCount":58,"pusher":{"login":"dcollins15","name":"David Collins","path":"/dcollins15","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23369610?s=80&v=4"},"commit":{"message":"Merge pull request #205 from satijalab/release/5.0.2\n\nRelease/5.0.2","shortMessageHtmlLink":"Merge pull request #205 from satijalab/release/5.0.2"}},{"before":"ee5ea0c0b987f574aa27c688ca64de20eff6a5b0","after":"ddd6100e9b25f425e6fc183d0206ba508541039c","ref":"refs/heads/visium-hd","pushedAt":"2024-05-07T21:09:52.000Z","pushType":"push","commitsCount":20,"pusher":{"login":"dcollins15","name":"David Collins","path":"/dcollins15","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23369610?s=80&v=4"},"commit":{"message":"Merge pull request #204 from satijalab/fix/image_subset\n\nFix/image subset","shortMessageHtmlLink":"Merge pull request #204 from satijalab/fix/image_subset"}},{"before":"098fcfe3fed166fc359970ea90e112e46f6bc7d0","after":"6be58e127f6c8f6dce1ada5ba2b917cfcccdd630","ref":"refs/heads/release/5.0.2","pushedAt":"2024-05-07T16:02:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dcollins15","name":"David Collins","path":"/dcollins15","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23369610?s=80&v=4"},"commit":{"message":"Fixup cran-comments... again","shortMessageHtmlLink":"Fixup cran-comments... again"}},{"before":"4d9de1744b12f8e0d0f5708475b339a3189878b8","after":"098fcfe3fed166fc359970ea90e112e46f6bc7d0","ref":"refs/heads/release/5.0.2","pushedAt":"2024-05-07T15:43:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dcollins15","name":"David Collins","path":"/dcollins15","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23369610?s=80&v=4"},"commit":{"message":"Fixup cran-comments.md","shortMessageHtmlLink":"Fixup cran-comments.md"}},{"before":null,"after":"4d9de1744b12f8e0d0f5708475b339a3189878b8","ref":"refs/heads/release/5.0.2","pushedAt":"2024-05-06T16:39:34.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"dcollins15","name":"David Collins","path":"/dcollins15","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23369610?s=80&v=4"},"commit":{"message":"Update cran-comments","shortMessageHtmlLink":"Update cran-comments"}},{"before":"71fff33108c38d258c4676741de7b0c711adee16","after":null,"ref":"refs/heads/fix/image_subset","pushedAt":"2024-05-04T02:51:52.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"mojaveazure","name":"Paul Hoffman","path":"/mojaveazure","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11035068?s=80&v=4"}},{"before":"ceafa1e080faaad3e5558921b3e5c5ab8a24826f","after":"ddd6100e9b25f425e6fc183d0206ba508541039c","ref":"refs/heads/develop","pushedAt":"2024-05-04T01:19:36.000Z","pushType":"pr_merge","commitsCount":4,"pusher":{"login":"dcollins15","name":"David Collins","path":"/dcollins15","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23369610?s=80&v=4"},"commit":{"message":"Merge pull request #204 from satijalab/fix/image_subset\n\nFix/image subset","shortMessageHtmlLink":"Merge pull request #204 from satijalab/fix/image_subset"}},{"before":"4f89579a50582009877b432a867154a5c346eb40","after":"71fff33108c38d258c4676741de7b0c711adee16","ref":"refs/heads/fix/image_subset","pushedAt":"2024-05-03T21:40:42.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"dcollins15","name":"David Collins","path":"/dcollins15","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23369610?s=80&v=4"},"commit":{"message":"Bump version","shortMessageHtmlLink":"Bump version"}},{"before":"ed0fb406c60e86e7b0fd5df6cc84e900f623696c","after":"ceafa1e080faaad3e5558921b3e5c5ab8a24826f","ref":"refs/heads/develop","pushedAt":"2024-05-03T18:08:38.000Z","pushType":"pr_merge","commitsCount":4,"pusher":{"login":"mojaveazure","name":"Paul Hoffman","path":"/mojaveazure","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11035068?s=80&v=4"},"commit":{"message":"Merge pull request #189 from maxim-h/patch-1\n\nAdd warning if layer is absent from assay","shortMessageHtmlLink":"Merge pull request #189 from maxim-h/patch-1"}},{"before":"d26593c03ff254be89f73a5ff0552f8efa0d0e02","after":"4f89579a50582009877b432a867154a5c346eb40","ref":"refs/heads/fix/image_subset","pushedAt":"2024-05-03T15:15:43.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dcollins15","name":"David Collins","path":"/dcollins15","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23369610?s=80&v=4"},"commit":{"message":"Add PR number to NEWS","shortMessageHtmlLink":"Add PR number to NEWS"}},{"before":"b7811b5f26b419778f4cab78ebef125335dded14","after":"d26593c03ff254be89f73a5ff0552f8efa0d0e02","ref":"refs/heads/fix/image_subset","pushedAt":"2024-05-03T15:11:12.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"dcollins15","name":"David Collins","path":"/dcollins15","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23369610?s=80&v=4"},"commit":{"message":"Bump version","shortMessageHtmlLink":"Bump version"}},{"before":null,"after":"b7811b5f26b419778f4cab78ebef125335dded14","ref":"refs/heads/fix/image_subset","pushedAt":"2024-05-03T15:10:50.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"dcollins15","name":"David Collins","path":"/dcollins15","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23369610?s=80&v=4"},"commit":{"message":"Bump version","shortMessageHtmlLink":"Bump version"}},{"before":"37f2e5e7da96384d9946cfd841981e387baa37c1","after":null,"ref":"refs/heads/fix/update-seurat-object","pushedAt":"2024-05-03T13:47:23.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"mojaveazure","name":"Paul Hoffman","path":"/mojaveazure","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11035068?s=80&v=4"}},{"before":"021852752c26dc2cf021315f4e26a542541ed967","after":"ed0fb406c60e86e7b0fd5df6cc84e900f623696c","ref":"refs/heads/develop","pushedAt":"2024-05-03T13:46:40.000Z","pushType":"pr_merge","commitsCount":5,"pusher":{"login":"dcollins15","name":"David Collins","path":"/dcollins15","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23369610?s=80&v=4"},"commit":{"message":"Merge pull request #199 from satijalab/fix/update-seurat-object\n\nUse `packageVersion(\"SeuratObject\")` in `UpdateSeuratObject()`","shortMessageHtmlLink":"Merge pull request #199 from satijalab/fix/update-seurat-object"}},{"before":"4c0a494552512fd4a46e583c5512f86f390d5b8d","after":"37f2e5e7da96384d9946cfd841981e387baa37c1","ref":"refs/heads/fix/update-seurat-object","pushedAt":"2024-05-03T10:34:29.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"dcollins15","name":"David Collins","path":"/dcollins15","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23369610?s=80&v=4"},"commit":{"message":"Bump version","shortMessageHtmlLink":"Bump version"}},{"before":"fb7daf95e7eb5681618e66a59b5ed55827c00079","after":"4c0a494552512fd4a46e583c5512f86f390d5b8d","ref":"refs/heads/fix/update-seurat-object","pushedAt":"2024-05-03T10:31:29.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"dcollins15","name":"David Collins","path":"/dcollins15","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23369610?s=80&v=4"},"commit":{"message":"Use `packageVersion(\"SeuratObject\")` in `UpdateSeuratObject()`\n\nUse the package version of SeuratObject instead of Seurat in `UpdateSeuratObject()`; this allows running `UpdateSeuratObject()` without requiring Seurat to be installed","shortMessageHtmlLink":"Use packageVersion(\"SeuratObject\") in UpdateSeuratObject()"}},{"before":"bad962698f0979d619548dfbd67f0ed0cad7c482","after":null,"ref":"refs/heads/fix/subset_feat","pushedAt":"2024-04-16T18:11:03.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"mojaveazure","name":"Paul Hoffman","path":"/mojaveazure","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11035068?s=80&v=4"}},{"before":"7bb17590fb54113e48839365b2693ffa16d7ad71","after":"021852752c26dc2cf021315f4e26a542541ed967","ref":"refs/heads/develop","pushedAt":"2024-04-16T18:02:45.000Z","pushType":"pr_merge","commitsCount":4,"pusher":{"login":"Gesmira","name":"gesmira","path":"/Gesmira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/59940281?s=80&v=4"},"commit":{"message":"Merge pull request #200 from satijalab/fix/subset_feat\n\nSubsetting feature-level metadata fix","shortMessageHtmlLink":"Merge pull request #200 from satijalab/fix/subset_feat"}},{"before":"7625fecccf87209dafe75daba3a492ca8269cd24","after":"bad962698f0979d619548dfbd67f0ed0cad7c482","ref":"refs/heads/fix/subset_feat","pushedAt":"2024-04-16T18:01:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Gesmira","name":"gesmira","path":"/Gesmira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/59940281?s=80&v=4"},"commit":{"message":"Update NEWS.md\n\nCo-authored-by: Paul Hoffman ","shortMessageHtmlLink":"Update NEWS.md"}},{"before":null,"after":"dff6a74e186f373da81d75c5c44b3d82c802361e","ref":"refs/heads/fix/bpcells_saving","pushedAt":"2024-04-15T20:41:15.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"Gesmira","name":"gesmira","path":"/Gesmira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/59940281?s=80&v=4"},"commit":{"message":"temporary fix for BPCells saving","shortMessageHtmlLink":"temporary fix for BPCells saving"}},{"before":"308bd208f9678307da5e105b5b82de34e52d243a","after":"7625fecccf87209dafe75daba3a492ca8269cd24","ref":"refs/heads/fix/subset_feat","pushedAt":"2024-04-15T16:07:17.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Gesmira","name":"gesmira","path":"/Gesmira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/59940281?s=80&v=4"},"commit":{"message":"bump version","shortMessageHtmlLink":"bump version"}},{"before":null,"after":"308bd208f9678307da5e105b5b82de34e52d243a","ref":"refs/heads/fix/subset_feat","pushedAt":"2024-04-15T15:59:00.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"Gesmira","name":"gesmira","path":"/Gesmira","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/59940281?s=80&v=4"},"commit":{"message":"move feature-level metadata subsetting","shortMessageHtmlLink":"move feature-level metadata subsetting"}},{"before":null,"after":"fb7daf95e7eb5681618e66a59b5ed55827c00079","ref":"refs/heads/fix/update-seurat-object","pushedAt":"2024-04-10T20:56:43.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"mojaveazure","name":"Paul Hoffman","path":"/mojaveazure","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11035068?s=80&v=4"},"commit":{"message":"Use `packageVersion(\"SeuratObject\")` in `UpdateSeuratObject()`\n\nUse the package version of SeuratObject instead of Seurat in `UpdateSeuratObject()`; this allows running `UpdateSeuratObject()` without requiring Seurat to be installed","shortMessageHtmlLink":"Use packageVersion(\"SeuratObject\") in UpdateSeuratObject()"}},{"before":"c2b5032419278e53498085a64bcc7a3a2d564a11","after":null,"ref":"refs/heads/fix/PolyVtx","pushedAt":"2024-04-03T20:30:57.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"mojaveazure","name":"Paul Hoffman","path":"/mojaveazure","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11035068?s=80&v=4"}},{"before":"ee5ea0c0b987f574aa27c688ca64de20eff6a5b0","after":"7bb17590fb54113e48839365b2693ffa16d7ad71","ref":"refs/heads/develop","pushedAt":"2024-04-03T20:30:51.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"mojaveazure","name":"Paul Hoffman","path":"/mojaveazure","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11035068?s=80&v=4"},"commit":{"message":"Merge pull request #194 from satijalab/fix/PolyVtx\n\nBug fix in `PolyVtx()`","shortMessageHtmlLink":"Merge pull request #194 from satijalab/fix/PolyVtx"}},{"before":"fa37bd4a0536bbbd0e3b8e55b0032703a1b2a2f9","after":"c2b5032419278e53498085a64bcc7a3a2d564a11","ref":"refs/heads/fix/PolyVtx","pushedAt":"2024-04-03T20:30:35.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mojaveazure","name":"Paul Hoffman","path":"/mojaveazure","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11035068?s=80&v=4"},"commit":{"message":"Update changelog\nBump develop version","shortMessageHtmlLink":"Update changelog"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAESxGAMQA","startCursor":null,"endCursor":null}},"title":"Activity ยท satijalab/seurat-object"}