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bmcite: inconsistency of the number of cells #68

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jcyang34 opened this issue May 25, 2023 · 0 comments
Open

bmcite: inconsistency of the number of cells #68

jcyang34 opened this issue May 25, 2023 · 0 comments

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@jcyang34
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Hi,

First of all, thanks for developing this useful package.

I have a question regarding the data processing steps of the bone marrow cite-seq data bmcite. The installed dataset is of 30,672 cells. However, the deposited dataset from GEO: [GSE128639] is of 33,454 cells and is not the superset of bmcite. I don't see any documentation on how these 30,672 cells are derived. Could you please explain the processing steps in more details?

Thanks in advance.

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