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Hi,
I followed the introduction of running the app using Docker.
In which I git clone the repo and use "docker build -t azimuth ." to create the docker image.
I also followed the step of "docker run -it -p 3838:3838 -v /path/to/reference:/reference-data:ro azimuth" to mount the reference to the container.
However, when I open the webpage of the app, this error appeared and the webpage turned grey.
> Azimuth::AzimuthApp(reference='/reference-data')
Registered S3 method overwritten by 'SeuratDisk':
method from
as.sparse.H5Group Seurat
Attaching shinyBS
Loading required package: shiny
Listening on http://0.0.0.0:3838
Warning: Overwriting miscellanous data for model
Warning: Adding a dimensional reduction (refUMAP) without the associated assay being present
Warning: Error in <-: could not find function "Key<-"
47: GetPlotRef.AzimuthData
45: LoadReference
41: server
4: runApp
1: Azimuth::AzimuthApp
Error in Key(plotref) <- gsub("\\.", "", Key(plotref)) :
could not find function "Key<-"
Any idea how to fix this? Thank you so much!!
The text was updated successfully, but these errors were encountered:
Hi,
I followed the introduction of running the app using Docker.
In which I git clone the repo and use "docker build -t azimuth ." to create the docker image.
I also followed the step of "docker run -it -p 3838:3838 -v /path/to/reference:/reference-data:ro azimuth" to mount the reference to the container.
However, when I open the webpage of the app, this error appeared and the webpage turned grey.
Any idea how to fix this? Thank you so much!!
The text was updated successfully, but these errors were encountered: