HTTP Error 406: Not Acceptable when downloading model

[victormaricato]

When I instanciate a model

from bio_embeddings.embed import SeqVecEmbedder
SeqVecEmbedder()

I get HTTP Error 406: Not Acceptable

Full stack-trace

weights.hdf5: 0.00B [00:00, ?B/s]
---------------------------------------------------------------------------
HTTPError                                 Traceback (most recent call last)
/tmp/ipykernel_19363/2484751941.py in <module>
----> 1 SeqVecEmbedder()

/opt/conda/lib/python3.7/site-packages/bio_embeddings/embed/seqvec_embedder.py in __init__(self, warmup_rounds, **kwargs)
     43         :param max_amino_acids: max # of amino acids to include in embed_many batches. Default: 15k AA
     44         """
---> 45         super().__init__(**kwargs)
     46 
     47         # Get file locations from kwargs

/opt/conda/lib/python3.7/site-packages/bio_embeddings/embed/embedder_interfaces.py in __init__(self, device, **kwargs)
     52         for file in self.necessary_files:
     53             if not self._options.get(file):
---> 54                 self._options[file] = get_model_file(model=self.name, file=file)
     55                 files_loaded += 1
     56 

/opt/conda/lib/python3.7/site-packages/bio_embeddings/utilities/remote_file_retriever.py in get_model_file(model, file, overwrite_cache)
    111     return str(cache_path)

/opt/conda/lib/python3.7/urllib/request.py in urlretrieve(url, filename, reporthook, data)
    245     url_type, path = splittype(url)
    246 
--> 247     with contextlib.closing(urlopen(url, data)) as fp:
    248         headers = fp.info()
    249 

/opt/conda/lib/python3.7/urllib/request.py in urlopen(url, data, timeout, cafile, capath, cadefault, context)
    220     else:
    221         opener = _opener
--> 222     return opener.open(url, data, timeout)
    223 
    224 def install_opener(opener):

/opt/conda/lib/python3.7/urllib/request.py in open(self, fullurl, data, timeout)
    529         for processor in self.process_response.get(protocol, []):
    530             meth = getattr(processor, meth_name)
--> 531             response = meth(req, response)
    532 
    533         return response

/opt/conda/lib/python3.7/urllib/request.py in http_response(self, request, response)
    639         if not (200 <= code < 300):
    640             response = self.parent.error(
--> 641                 'http', request, response, code, msg, hdrs)
    642 
    643         return response

/opt/conda/lib/python3.7/urllib/request.py in error(self, proto, *args)
    567         if http_err:
    568             args = (dict, 'default', 'http_error_default') + orig_args
--> 569             return self._call_chain(*args)
    570 
    571 # XXX probably also want an abstract factory that knows when it makes

/opt/conda/lib/python3.7/urllib/request.py in _call_chain(self, chain, kind, meth_name, *args)
    501         for handler in handlers:
    502             func = getattr(handler, meth_name)
--> 503             result = func(*args)
    504             if result is not None:
    505                 return result

/opt/conda/lib/python3.7/urllib/request.py in http_error_default(self, req, fp, code, msg, hdrs)
    647 class HTTPDefaultErrorHandler(BaseHandler):
    648     def http_error_default(self, req, fp, code, msg, hdrs):
--> 649         raise HTTPError(req.full_url, code, msg, hdrs, fp)
    650 
    651 class HTTPRedirectHandler(BaseHandler):

HTTPError: HTTP Error 406: Not Acceptable

Happens just after the clean install of bio-embeddings[all].

[victormaricato]

Closing as it is a duplicate of #156