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Load 'air freshener' dose data #151

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kdionisio opened this issue Jul 19, 2017 · 6 comments
Open

Load 'air freshener' dose data #151

kdionisio opened this issue Jul 19, 2017 · 6 comments

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@kdionisio
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Load directly to production database, after #146 is complete

@kdionisio kdionisio added this to the Production release 1.X milestone Jul 19, 2017
@kdionisio kdionisio self-assigned this Jul 19, 2017
@kdionisio kdionisio added this to TODO in Fukuisaurus Jul 19, 2017
@kdionisio kdionisio moved this from TODO to In Progress in Fukuisaurus Jul 20, 2017
@kdionisio
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Note: Data was loaded to DEVELOPMENT database

LOAD DATA LOCAL INFILE '/home/kdionisio/HEMDBLoad/S2D_daily_all_airfreshener.csv' INTO TABLE hem_app_dose FIELDS TERMINATED BY ',' ENCLOSED BY '"' ignore 1 lines (person_id, @chemical, day, dir_derm_exp, dir_derm_max, dir_derm_abs, dir_inhal_exp, dir_inhal_mass, dir_inhal_max, dir_inhal_abs, dir_ingest_exp, dir_ingest_abs, hem_app_dose.release, ind_derm_exp, ind_derm_max, ind_derm_abs, ind_inhal_exp, ind_inhal_max, ind_inhal_mass, ind_inhal_abs, ind_ingest_exp, ind_ingest_abs, out_sur, out_air, drain, waste) SET created_at = NOW(), updated_at = NOW(), chemical_id = (SELECT id FROM hem_app_chemical WHERE dtxsid = @chemical), runparams_id=3; 

@kdionisio kdionisio moved this from In Progress to QA in Fukuisaurus Jul 21, 2017
@kdionisio
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currently includes 1 chemical

@kdionisio kdionisio moved this from QA to Done in Fukuisaurus Jul 24, 2017
@kdionisio
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Dose results not valid; must re-run with updated code and re-loaded into DB

@kdionisio kdionisio reopened this Aug 1, 2017
@kdionisio kdionisio moved this from Done to TODO in Fukuisaurus Aug 1, 2017
@kdionisio
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kdionisio commented Aug 10, 2017

Command to load dose results into DB after chemical_id matching has been done in R. Dose results are from 8/3 S2D version.

LOAD DATA LOCAL INFILE '/home/kdionisio/HEM/output/S2D/airfreshener_OPP/Daily/S2D_daily_all_airfreshener_OPP.csv' INTO TABLE hem_app_dose FIELDS TERMINATED BY ',' ENCLOSED BY '"' ignore 1 lines (person_id, chemical_id, day, dir_derm_exp, dir_derm_max, dir_derm_abs, dir_inhal_exp, dir_inhal_mass, dir_inhal_max, dir_inhal_abs, dir_ingest_exp, dir_ingest_abs, hem_app_dose.release, ind_derm_exp, ind_derm_max, ind_derm_abs, ind_inhal_exp, ind_inhal_max, ind_inhal_mass, ind_inhal_abs, ind_ingest_exp, ind_ingest_abs, out_sur, out_air, drain, waste) SET created_at = NOW(), updated_at = NOW(), runparams_id=3; 

@kdionisio kdionisio moved this from TODO to In Progress in Fukuisaurus Aug 10, 2017
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Loaded into prod_hem

@kdionisio kdionisio moved this from In Progress to QA in Fukuisaurus Aug 10, 2017
@kdionisio
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@dmlyons2 same error as in #168. This product (air freshener) should plot 23 chemicals.

@kdionisio kdionisio assigned dmlyons2 and kdionisio and unassigned kdionisio and dmlyons2 Aug 10, 2017
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