IndexError: list index out of range

[tobimichigan]

While trying to run your code, from main.py the following error occurs:

Traceback (most recent call last): File "DenseNet-MURA-PyTorch/main.py", line 12, in <module> study_data = get_study_level_data(study_type='/XR_WRIST') File "DenseNet-MURA-PyTorch/pipeline.py", line 22, in get_study_level_data patients = list(os.walk(BASE_DIR))[0][1] # list of patient folder names IndexError: list index out of range

It seems as if pipeline.py depends on main.py or vice versa
Besides, where in the code do you actually declare the root dir for the dataset?

[great-energizer]

In pipeline.py file,
for phase in data_cat:
BASE_DIR = 'MURA-v1.0/%s/%s/' % (phase, study_type)
patients = list(os.walk(BASE_DIR))[0][1]

you need to change folder name from MURA-v1.0 to MURA-v1.1. The data is updated.