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DESCRIPTION
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DESCRIPTION
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Package: rosace
Title: statistical inference of growth-based deep mutational scanning (DMS) screens
Version: 0.1.0
Authors@R:
person("Jingyou", "Rao", , "roserao@ucla.edu", role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-4331-8786"))
Description: A robust deep mutational scanning analysis framework employing position and mean-variance shrinkage.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
Suggests:
knitr,
rmarkdown,
testthat (>= 3.0.0)
Config/testthat/edition: 3
Imports:
cmdstanr,
colorspace,
compositions,
dplyr,
ggplot2,
ggpubr,
grDevices,
impute,
jsonlite,
MASS,
mclust,
methods,
philentropy,
posterior,
readr,
rjson,
stats,
stringr,
tidyr,
utils
Remotes: bioc::release/impute
VignetteBuilder: knitr
Depends:
R (>= 2.10)
LazyData: true
LazyDataCompression:xz