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When I run the BEAST v.1.10.4 for the file "M390_ME.xml", it reports error. #1

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liamxg opened this issue Nov 17, 2023 · 0 comments

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@liamxg
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liamxg commented Nov 17, 2023

Read alignment: alignment
Sequences = 390
Sites = 8055
Datatype = nucleotide
Site patterns 'patterns' created from positions 1-8055 of alignment 'alignment'
unique pattern count = 6070
Changing height of node A_CD_DRC60ANcon_1960 from 51.64515510983314 to 55.0
Changing height of node D_CD_ZR59_1959 from 59.99690459523748 to 56.0
Changing height of node C_CD_DRC66_1966 from 54.27218514676089 to 49.0

Creating the tree model, 'treeModel'
taxon count = 390
tree height = 99.06735717380289
Nov 17, 2023 7:21:14 PM dr.app.beast.BeastMain
SEVERE: Parsing error - poorly formed BEAST file, M390_ME.xml:
The '' element, nested within an element with id, 'fixedEffectsModel', is incorrectly constructed.
The following was expected:
Exactly one ELEMENT of type Parameter REQUIRED

Error thrown at: dr.xml.AbstractXMLObjectParser.parseXMLObject(Unknown Source)

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