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hivsequence.py
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hivsequence.py
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# HIV sequence
# from https://kaspermunch.wordpress.com/2013/11/13/dictionaries/comment-page-1/
hivSeq = "AAGCTTGCCTTGAGTGCTTCAAGTAGTGTGTGCCCGTCTGTTGTGTGACTCTGGTAACTAGAGATCCCTCAGACCACTCTAGACGGTGTGAAAATCTCTAGCAGTGGCGCCCGAACAGGGACTCGAAAGCGAAAGTTCCAGAGAAGTTCTCTCGACGCAGGACTCGGCTTGCTGAGGTGCACACAGCAAGAGGCGAGAGCGGCGACTGGTGAGTACGCCAATTTTTTGACTAGCGGAGGCTAGAAGGAGAGAGATGGGTGCGAGAGCGTCAGTATTAAGCGGGGGAAAATTCGATGCATGGGAGAAAATTCGGTTAAGGCCAGGGGGAAAGAAAAAATATAGAATGAAGCATCTAATATGGGCAAGCAGGGAGCTGGACAGATTTGCACTTAACCCTAGCCTTTTAGAAACAGCAGACGGATGTCAACAAATAATGGAAAAATTACAACCAGCTCTCAAGACAGGAACAGAAGAAATAAAATCATTATTTAATACTGTAGCAACCCTCTATTGTGTACATCAACGGATAGATGTAAAAGACACCAAGGAAGCTCTAGATAAAATAGAGGAAATAAAAAATAAGAGCAAGCAAAAGACACAACAGGCAGCAGCTGACACAGGAAACAGCAGCAATGTCAGCCAAAATTACCCTATAGTGCAAAATGCACAAGGGCAAATGATACACCAGTCCTTGTCACCTAGGACTTTGAATGCATGGGTAAAAGTAATAGAAGAAAAGGCTTTCAGCCCAGAAGTAATACCCATGTTCTCAGCATTATCAGAAGGAGCCACCCCACAAGATTTAAATATGATGCTGAACATAGTGGGGGGACACCAGGCAGCTATGCAAATGTTAAAAGATACCATCAATGAGGAAGCTGCAGAATGGGACAGGTTACATCCAGTACATGCAGGGCCTATCCCACCAGGCCAGATGAGAGAACCAAGGGGAAGTGACATAGCAGGAACTACTAGTACCCCTCAAGAACAAATAGGGTGGATGACAGGCAACCCACCTATCCCAGTGGGAGACATCTATAAAAGATGGATAATTCTGGGATTAAATAAAATAGTAAGAATGTATAGCCCTGTTAGCATTTTGGATATAAAACAAGGGCCAAAAGAACCCTTCAGAGATTATGTAGATAGGTTTTTTAAAACTTTCAGAGCTGAGCAAGCTACACAGGATGTAAAAAATTGGATGACAGACACATTACTGGTCCAAAATGCAAATCCAGATTGCAAGGCAATTTTAAGAGCATTAGGACCAGGGGCTACATTAGAAGAAATGATGACAGCATGCCAGGGAGTGGGAGGACCCGGCCATAAAGCAAGGGTTTTGGCTGAGGCAATGAGTCAAGTACAACATACAAACATAATGATGCAGAGAGGCAATTTTAAGGGCCAGAAAAGAATTAAGTGTTTCAACTGTGGCAAAGAAGGACACCTAGCCAGAAATTGCAGGGCCCTTAGGAAAAAGGGCTGTTGGAAATGTGGGAAGGAGGGACACCAAATGAAAGATTGCACTGAAAGACAGGCTAATTTTTTAGGGAAAATTTGGCCTTCCAGAAAGGGGAGGCCAGGGAATTTTCCTCAGAACAGACTGGAACCAACAGCTCCACCAGCAGAGACCTGTGGGATGGGGGAAGAGACAGTCTCCCCTCTGAAGCAGGAGCAGAAAGACAGGGAACAGGCCCAACCCTTAGTTTCCCTCAAATCACTCTTTGGCAACGACCTCTTGTCACAGTAAGAATAGGGGGACAGCTAAAAGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGACATAAATTTGCCAGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTCATCAAGGTAAAACAATATGATCAGATACTTATAGAAATTTGTGGGAAAAAGGCTATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAACATGTTGACTCAGATTGGTTGTACTTTAAATTTCCCAATTAGTCCTATTGAGACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAAGGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAACAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAATCCATATAATACTCCAATATTTGCAATAAAGAAAAAAGATAGCACTAAGTGGAGAAAATTAGTAGATTTCAGAGAGCTCAATAAAAGAACACAAGACTTTTGGGAAGTTCAATTAGGGATACCGCATCCAGCGGGTCTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTGGGGGACGCATATTTTTCAGTTCCTTTACATGAAGAGTTTAGGAAATATACTGCATTCACCATACCTAGTACAAACAACGAGACACCAGGAGTCAGGTATCAGTACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAGAGTAGCATGACAAAAATCTTAGAGCCCTTTAGATCAAAAAATCCAGAAATAGTTATCTATCAATACATGGATGATTTGTATGTAGGATCTGATTTAGAAATAGGGCAGCATAGAGCAAAGATAGAAGAATTAAGAGCTCATCTATTGAGCTGGGGACTTATTACACCAGACAAAAAGCATCAGAAAGAACCTCCATTCCTTTGGATGGGATATGAGCTCCATCCTGACAAGTGGACAGTCCAGCCTATAGAGCTGCCAGAAAAAGACAGCTGGACTGTCAATGATATACAGAAATTAGTGGGGAAACTAAATTGGGCAAGTCAGATTTATGCAGGAATTAAAGTAAAGCAATTATGTAAACTCCTCAGGGGAGCCAAAGCACTAACAGATGTAGTAACATTGACTGAGGAAGCAGAATTAGAATTGGCAGAGAACAGGGAGATTCTAAAAGAACCTGTACATGGGGTATATTATGACCCATCAAAAGACTTAATAGCAGAAATACAGAAACAAGGGCAAGACCAATGGACATATCAAATTTTTCAAGAGCCATTTAAAAATCTAAAAACAGGAAAATATGCAAGAAAAAGGTCTGCTCACACTAATGATGTAAGACAATTAGCAGAAGTGGTGCAAAAGGTGGTCATGGAAAGCATAGTAATATGGGGAAAGACTCCTAAATTTAGACTACCCATACAAAAAGAAACATGGGACACATGGTGGATGGACTATTGGCAGGCTACCTGGATTCTTGAATGGGAATTTGTCAATACCCCTCCTCTAGTAAAATTGTGGTACCAATTAGAGAAAGACCCCATAGCAGGAGCAGAGACTTTCTATGTAGATGGGGCAGCTAATAGGGAAACTAAGCTAGGAAAAGCAGGATATGTTACTGATAAGGGAAGACAAAAGGTAGTTTCCCTAACTGAGACAACAAATCAAAAGACTGAACTACATGCAATCCATTTAGCCTTGCAGGATTCAGGATCAGAAGTAAACATAGTAACAGACTCACAATATGCATTAGGAATCATTCAGGCACAACCAGACAAGAGTGAATCAGAGATAGTCAATCAAATAATAGAGAAGCTAATAGAAAAGGACAAAGTTTACCTGTCATGGGTACCAGCACACAAAGGAATTGGAGGAAATGAACAAGTAGATAAATTAGTCAGTTCCGGAATCAGAAAGGTGCTGTTTTTAGATGGGATAGACAAAGCTCAAGAAGAACATGAAAGATATCATAGCAATTGGAGAACAATGGCTAGTGATTTTAATCTGCCACCTATAGTAGCAAAAGAAATAGTAGCCAGCTGTGATAAATGTCAGCTAAAAGGGGAAGCCATGCATGGACAAGTAGACTGCAGTCCAGGAATATGGCAATTAGATTGCACACATTTAGAAGGGAAAGTAATTGTGGTAGCAGTTCATGTAGCCAGTGGCTATATAGAAGCAGAAGTTATCCCAGCAGAAACAGGACAAGAGACAGCATACTTTCTACTAAAATTAGCAGGAAGATGGCCAGTAAAAATAGTACACACAGACAATGGCAGCAATTTCACCAGCGCTGCAGTTAAAGCAGCCTGTTGGTGGGCAAATATCCAACAGGAATTTGGGATTCCCTACAATCCCCAAAGTCAAGGAGTAGTGGAATCTATGAATAAGGAATTAAAGAAAATCATAGGGCAAGTAAGAGAGCAAGCTGAACACCTTAAAACAGCAGTACAAATGGCAGTATTCATTCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAATAGACATAATAGCAACAGACATACAAACTAAAGAATTACAAAAACACATTACAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCACTTTGGAAAGGACCAGCAAAACTATTCTGGAAAGGTGAAGGGGCAGTAGTAATACAGGACAATAGTGACATAAAGGTAGTACCAAGAAGAAAAGCAAAGATCATTAGGGATTATGGAAAACAGATGGCAGGCGATGATTGTGTGGCAGGTAGACAGGATGAGGATTAGAACATGGAACAGTTTAGTAAAACATCATATGCATGTCTCCAAGAAAGCAAAAAGGTGGTTTTATAGACATCACTATGAAAGCAGGCATCCAAAAGTAAGTTCAGAAGTACACATCCCACTAGGGGATGCTACATTAGTAGTAAGAGCATATTGGGGTCTGCATACAGGAGAAAAAGACTGGCACTTGGGTCATGGGGTCTCCATAGAATGGAGGCTAAAAAGATATAGCACACAAATAACTCCTGACCTGGCAGACCAACTAATTCATATGCATTATTTTGACTGTTTTTCAGACTCTGCCATAAGGAAAGCCATAGTAGGACAAGTAGTTAGTCCTAAATGTGAATATCAAGCAGGACATAACAAGGTAGGATCTCTACAATATTTAGCACTGAAAGCATTAGTAACACCAAAAAAGACAAAGCCACCTTTGCCTAGTGTTAGGATATTAACAGAAGATAGATGGAACAAGCCCCAGAAGACCAGGGGCCTCAGAGAGAGCCACACAATGAATGGATGTTAGAGCTGTTAGATGATCTTAAGCATGAAGCTGTTAGACATTTTCCTAGGCCATGGCTTCATGGATTAGGACAACATATCTATAACACCTATGGAGATACTTGGGAAGGAGTTGAAGCTATAACAAGAATTCTGCAACAACTACTGTTTGTTCATTTCAGAATTGGGTGCCAACATAGCAGAATAGGCATTATTCCAGGGAGAAGAGGCAGGAATGGACCCGGTAGATCCTAACCTAGAGCCCTGGAATCACCCGGGAAGTCAGCCTACAACTGCTTGCAACAAATGTTACTGTAAAAAGTGTTGTTATCATTGTCAAGTTTGCTTTTTGAACAAAGGCTTAGGCATCTCCTATGGCAGGAAGAAGCGGAGACAGCGACGAGGAGCTCCTCAGAGCAGTAAGGATCATCAAAATTCTATACAAAAGCAGTAAGTATTAGTAATAAGTATATGTAATGTCTCCTTTGGAAATCAGTGCAATAGTAGGGCTGATAGTAGCGCTAATCCTAGCAATAGCTGTGTGGACTATAGTAGGTATAGAATATAAGAAAATAAGAAAACAAAGAAAAATAGATAGGTTGATTGAGAGAATAAGAGAAAGAGCAGAAGACAGTGGCAATGAGAGTGATGGGGATACAGAGGAATTGTCAACACTTATTGACATGGGGGATTATGATCTTGGGGACAATAATATTCTGTAGTGCTGTGGAAAACTTGTGGGTTACTGTCTATTATGGGGTACCTGTGTGGAGAGATGCAGACACCACCTTATTTTGTGCATCAGATGCTAAAGCATATGAGACAGAAAAGCATAATGTCTGGGCTACACATGCTTGTGTACCCACAGACCCCAACCCACAAGAAATACATTTGGACAATGTGACAGAAAAGTTTAACATGTGGAAAAATAACATGGTAGAGCAGATGCACACAGATATAATCAGTCTATGGGATCAAAGCCTAAAGCCATGTGTAAAGTTAACCCCTCTCTGCGTTACTTTACATTGTACAAATGTCACAAGTGTCAACACCACTGGAGACAGGGAAGGCTTAAAAAACTGCTCTTTCAATATGACCACAGAACTAAGGGATAAGAGACAGAAAGTATATTCACTTTTTTATAGACTTGATATAGTACCAATTAATGAAAATCAGGGTAGTGAATATAGATTAATAAATTGTAATACCTCAGCCATTACACAGGCGTGCCCAAAGGTATCCTTTGAGCCAATTCCTATACATTATTGTACCCCAGCTGGTTTTGCGATCCTAAAGTGTAAGGATGAGGGGTTCAATGGGACAGGGTTATGCAAGAATGTCAGCACAGTCCAATGCACACATGGAATCAAGCCAGTAGTATCAACTCAATTGCTGTTGAATGGCAGTCTAGCAGAAAAAAATATAACAATTAGATCTGAAAATATCACAAACAATGCCAAAATTATAATAGTACAACTTGTCCAACCTGTGACAATTAAGTGTATCAGACCTAACAACAATACAAGAAAAAGTATACGTATAGGACCAGGACAAGCATTCTATGCAACAGGTGACATAATAGGGGATATAAGACAAGCACATTGTAATGTCACTAGATCAAGATGGAATAAGACTTTACAAGAGGTAGCTGAAAAATTAAGAACATACTTTGGGAACAAAACAATAATATTTGCTAACTCCTCAGGAGGGGATCTAGAGATCACAACACATAGTTTTAATTGTGGAGGAGAATTTTTCTATTGTAATACATCAGGCTTGTTTAATAGCACTTGGTATGTTAATAGCACTTGGAATGACACTGACAGCACTCAGGAGTCAAATGACACTATAACTCTCCCATGCAGAATAAAGCAAATTATAAATATGTGGCAGAGAGCAGGACAAGCAATGTATGCCCCTCCCATCCCAGGAGTAATAAAGTGTGAATCAAACATTACAGGACTACTATTAACAAGGGATGGTGGAAAGGATAACAATGTAAATGAAACCTTCAGACCTGGAGGAGGAGATATGAGGGACAATTGGAGAAGTGAATTATATAAGTATAAAGTAGTAGAAATTGAACCACTAGGAGTAGCACCTACCAGGGCAAAGAGAAGAGTGGTGGAGAGAGAAAAAAGAGCAGTTGGAATAGGAGCTGTCTTCCTTGGGTTCTTAGGAGCAGCAGGAAGCACTATGGGCGCAACGTCAATAACGCTGACGGTACAGGCCAGACAATTATTGTCTGGCATAGTGCAACAGCAAAACAATTTGCTGAGGGCTATAGAGGCTCAACAACATCTGTTGAAACTCACGGTCTGGGGCATTAAACAGCTCCAGGCAAGAGTCCTGGCTGTGGAAAGATACCTAAGGGATCAACAGCTCCTAGGAATTTGGGGCTGCTCTGGAAAACTCATCTGCACCACTAATGTGCCCTGGAACTCTAGTTGGAGTAATAAATCTCTGGATGAGATATGGAACAACATGACCTGGCTGCAATGGGATAAAGAAATTAACAATTACACACAACTAATATATAGACTAATTGAAGAATCGCAGAACCAGCAGGAAAAGAATGAAAAGGAATTATTGGAGTTGGACAAGTGGGCAAATCTGTGGAGTTGGTTTGACATATCAAATTGGCTGTGGTATATAAAAATATTTATAATAATAGTAGGAGGCTTAATAGGATTAAGAATAGTTTTTGCTGTGCTTTCTGTAATAAATAGAGTTAGGCAGGGATACTCACCTTTGTCATTTCAGACCCATACCCCAAACCCAAGGGGTCTCGACAGGCCCGAAAGAATCGAAGAAGAAGATGGAGAGCAAGGCAGAGGCAGATCGATTCGATTAGTGAGCGGATTCTTAGCACTTGCTTGGGACGACCTACGGAGCCTGTGCCTCTTCAGCTACCACCGCTTGAGAGACTTCATCTTGATTGCTGCGAGGACTGTGGAACTTCTGGGACACAGCAGTCTCAAGGGGCTGAGACTGGGGTGGGAAGGCATCAAGTATCTGTGGAATCTCCTGTCATATTGGGGTCGGGAACTAAAAATTAGTGCTATTAATCTAGTTGATACCATAGCAATAGCAGTAGCTGGCTGGACAGATAGGGTTATAGAAATAGCACAAAGAATTGGTAGAGCTATCCTCCACATACCTGTAAGAATCAGACAGGGCTTAGAAAGGGCTTTGCTATAACATGGGGGGCAAGTGGTCAAAAAGTAGCATAGTGGGATGGCCTGAGATTAGGGAAAGAATGAGACGTGCCCCTCCAGCAGCACCAGGAGTAGGAGCAGTATCTCAAGACTTAGATAAACATGGAGCAGTCACAAGTAAGAATATAAATCACCCTAGTTACGCCTGGCTGGAAGCGCAAGAGGACGAGGATGTAGGCTTTCCAGTCAGGCCACAAGTACCTCTAAGACCAATGACTTACAAGGGAGCTGTGGATCTCAGCCACTTTTTAAAAAAAAAGGGGGGACTGGATGGGTTAGTTTACTCTAGGAAAAGACAAGAAATCCTTGATCTGTGGGTCTATCACACACAAGGCTATTTCCCTGATTGGCAGAATTACACACCAGGGCCAGGGACCAGGTTCCCACTAACATTTGGGTGGTGCTTCAAGCTAGTACCAGTTGATCCAGATGAAGTAGAGAAGGCTACTGAGGGAGAGAACAACAGCCTATTACACCCGATATGTCAACATGGAATGGATGATGAAGAGAGAGAAGTATTAAAGTGGAAGTTTGACAGCCGCCTGGCACTAAAACACAGAGCCCGAGAGCTGCATCCGGAGTGGTACAAGGACTGCTGACACAGAAGTTGTTGACTGGGACTTTCCGCTGGGGACTTTCCAGGGGAGGTGTGGTTTGGGCGGAGTTGGGGAGTGGCCAACCCTCAGATGCTGCATATAAGCAGCTGCTTTTCGCCTGTACTGGGTCTCTCTTGTTAGACCAGATCGAGCCTGGGAGCTCTCTGGCTAGCTGGGGAACCCACTGCTTAAGCCTCAATAAAGCTTGCCTTGAGTGCTTCAAGTAGTGTGTGCCCGTCTGTTGTGTGACTCTGGTAACTAGAGATCCCTCAGACCACTCTAGACGGTGTAAAA"