{"payload":{"pageCount":2,"repositories":[{"type":"Public","name":"msPurity","owner":"computational-metabolomics","isFork":false,"description":"R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics","topicNames":["metabolomics","mass-spectrometry","lc-ms","fragmentation","bioconductor-package","dims","lc-msms","precursor-ion-purity"],"topicsNotShown":0,"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":9,"starsCount":15,"forksCount":3,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-10T10:48:45.568Z"}},{"type":"Public","name":"dmadb-docs","owner":"computational-metabolomics","isFork":false,"description":"","topicNames":[],"topicsNotShown":0,"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-09T16:17:13.053Z"}},{"type":"Public","name":"sirius-csifingerid-galaxy","owner":"computational-metabolomics","isFork":false,"description":"","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":1,"starsCount":2,"forksCount":4,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-13T08:34:18.370Z"}},{"type":"Public","name":"struct","owner":"computational-metabolomics","isFork":false,"description":"R/Bioconductor package - STRUCT: STatistics in R Using Class Templates","topicNames":["machine-learning","statistics","metabolomics","r-package","lc-ms","multivariate-analysis","bioconductor-package","dims","univariate"],"topicsNotShown":0,"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":9,"starsCount":5,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-03-21T15:45:48.986Z"}},{"type":"Public","name":"pmp","owner":"computational-metabolomics","isFork":false,"description":"R/Bioconductor package - Peak Matrix Processing and signal batch correction for metabolomics data sets","topicNames":["statistics","metabolomics","mass-spectrometry","scaling","r-package","lc-ms","data-processing","normalisation","bioconductor-package","dims"],"topicsNotShown":1,"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":1,"starsCount":2,"forksCount":1,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-03-08T08:59:53.378Z"}},{"type":"Public","name":"django-mogi","owner":"computational-metabolomics","isFork":false,"description":"Metabolomics Organisation with Galaxy and ISA","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":11,"issueCount":0,"starsCount":3,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-21T14:42:06.058Z"}},{"type":"Public","name":"structToolbox","owner":"computational-metabolomics","isFork":false,"description":"R/Bioconductor package - STRUCT (STatistics in R Using Class Templates) Toolbox","topicNames":["machine-learning","statistics","metabolomics","r-package","lc-ms","multivariate-analysis","bioconductor-package","dims","univariate"],"topicsNotShown":0,"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":10,"starsCount":8,"forksCount":4,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-02T11:22:33.153Z"}},{"type":"Public","name":"ptox-metadata-manager","owner":"computational-metabolomics","isFork":true,"description":"The PrecisionTox Metadata Manager API","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":"GNU Affero General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-12-18T13:30:41.130Z"}},{"type":"Public","name":"cfm-galaxy","owner":"computational-metabolomics","isFork":false,"description":"Galaxy tool for applying Competitive Fragmentation Modeling (CFM)","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":7,"starsCount":1,"forksCount":2,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-15T16:17:59.502Z"}},{"type":"Public","name":"metabolomicsWorkbenchR","owner":"computational-metabolomics","isFork":false,"description":"R/Bioconductor Package - Interface to the Metabolomics Workbench RESTful API","topicNames":["metabolomics","r-package","lc-ms","nmr-spectroscopy","bioconductor-package","metabolomics-data"],"topicsNotShown":0,"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":1,"starsCount":8,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-09-25T14:56:46.797Z"}},{"type":"Public","name":"conda-computational-metabolomics","owner":"computational-metabolomics","isFork":false,"description":"A collection of conda recipes and build workfow for the conda computational-metabolomics channel.","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-08-04T22:59:53.765Z"}},{"type":"Public","name":"staged-recipes","owner":"computational-metabolomics","isFork":true,"description":"A place to submit conda recipes before they become fully fledged conda-forge feedstocks","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":4639,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-08-03T18:30:03.491Z"}},{"type":"Public","name":"dimspy","owner":"computational-metabolomics","isFork":false,"description":"Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data","topicNames":["metabolomics","mass-spectrometry","raw","mzml","untargeted-metabolomics","dims"],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":2,"issueCount":1,"starsCount":18,"forksCount":9,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-07-06T21:44:44.168Z"}},{"type":"Public","name":"django-gfiles","owner":"computational-metabolomics","isFork":false,"description":"Simple file management in Django","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-06-29T08:51:45.891Z"}},{"type":"Public","name":"django-galaxy","owner":"computational-metabolomics","isFork":false,"description":"Galaxy interfacing with Django","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-06-20T14:39:41.614Z"}},{"type":"Public","name":"beamspy","owner":"computational-metabolomics","isFork":false,"description":"BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)","topicNames":["metabolomics","mass-spectrometry","lc-ms","dims","metabolite-identification"],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":1,"starsCount":15,"forksCount":5,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-05-12T13:25:20.870Z"}},{"type":"Public","name":"metaboblend","owner":"computational-metabolomics","isFork":false,"description":"Python package for de novo structural elucidation of small molecules in mass spectrometry-based Metabolomics","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"C","color":"#555555"},"pullRequestCount":2,"issueCount":0,"starsCount":4,"forksCount":1,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-11-07T18:21:17.332Z"}},{"type":"Public","name":"beamspy-galaxy","owner":"computational-metabolomics","isFork":false,"description":"Galaxy tools for BEAMSpy: Birmingham mEtabolite Annotation for Mass SpectroMetry (Python Package)","topicNames":["databases","metabolomics","lc-ms","dims","metabolites","metabolite-identification"],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":0,"starsCount":2,"forksCount":2,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-05-04T06:19:01.662Z"}},{"type":"Public","name":"mspurity-galaxy","owner":"computational-metabolomics","isFork":false,"description":"Galaxy tools for msPurity package: includes precursor ion purity calculations and spectral matching","topicNames":["metabolomics","mass-spectrometry","fragmentation","dims","precursor-ion-purity","galaxy","lc-ms"],"topicsNotShown":0,"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":8,"starsCount":2,"forksCount":6,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-02-08T13:21:12.666Z"}},{"type":"Public","name":"metabolabpy","owner":"computational-metabolomics","isFork":true,"description":"NMR data processing","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":3,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-09-23T11:35:29.768Z"}},{"type":"Public","name":"msnpy","owner":"computational-metabolomics","isFork":false,"description":"Python package for processing and annotation of MSn fragmentation data","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":0,"starsCount":0,"forksCount":1,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-09-14T11:04:39.448Z"}},{"type":"Public","name":"metexpy","owner":"computational-metabolomics","isFork":false,"description":"MetExPy: Python package to search, extract and rename metabolite and lipid names using regular expression","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-07-09T15:58:18.366Z"}},{"type":"Public","name":"amimspy","owner":"computational-metabolomics","isFork":false,"description":"Python package for processing acoustic mist ionization mass spectrometry-based metabolomics and lipidomics data","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-06-18T14:12:21.213Z"}},{"type":"Public","name":"msp2db","owner":"computational-metabolomics","isFork":false,"description":"Convert MSP files into a database ","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":1,"starsCount":8,"forksCount":6,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-05-04T14:35:39.231Z"}},{"type":"Public","name":"dimspy-galaxy","owner":"computational-metabolomics","isFork":false,"description":"Galaxy tools for Python package DIMSpy: data processing of Direct-Infusion Mass Spectrometry-based metabolomics and lipidomics data","topicNames":["galaxy","metabolomics","mass-spectrometry","lipidomics","galaxy-tool","dims"],"topicsNotShown":0,"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":4,"forksCount":4,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-04-01T09:11:34.269Z"}},{"type":"Public","name":"msnpy-galaxy","owner":"computational-metabolomics","isFork":false,"description":"Galaxy tools for Python package MSnPy: data-processing and annotating MSn-based metabolomics and lipidomics data\"","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-04-01T09:10:50.347Z"}},{"type":"Public","name":"xlsxbuilder","owner":"computational-metabolomics","isFork":false,"description":"xlsxbuilder","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-03-01T11:38:02.962Z"}},{"type":"Public","name":"bioconda-recipes","owner":"computational-metabolomics","isFork":true,"description":"Conda recipes for the bioconda channel.","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":3046,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-11-16T19:44:21.658Z"}},{"type":"Public","name":"msp2db-galaxy","owner":"computational-metabolomics","isFork":false,"description":"Galaxy tool for msp2db","topicNames":[],"topicsNotShown":0,"primaryLanguage":null,"pullRequestCount":1,"issueCount":0,"starsCount":1,"forksCount":1,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-11-14T16:34:36.365Z"}},{"type":"Public","name":"structReport","owner":"computational-metabolomics","isFork":false,"description":"R/Bioconductor package - STRUCT report","topicNames":["machine-learning","statistics","metabolomics","r-package","lc-ms","multivariate-analysis","bioconductor-package","univariate"],"topicsNotShown":0,"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-11-06T14:23:52.254Z"}}],"repositoryCount":36,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"mirror","text":"Mirrors"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"Repositories"}