{"payload":{"pageCount":5,"repositories":[{"type":"Public","name":"annoq-database","owner":"USCbiostats","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":2,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-31T06:28:08.423Z"}},{"type":"Public","name":"annoq-site","owner":"USCbiostats","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"TypeScript","color":"#3178c6"},"pullRequestCount":1,"issueCount":13,"starsCount":0,"forksCount":2,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-31T06:06:02.346Z"}},{"type":"Public","name":"annoq-data-builder","owner":"USCbiostats","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":10,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-31T05:53:50.388Z"}},{"type":"Public","name":"peregrine","owner":"USCbiostats","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-31T00:21:39.936Z"}},{"type":"Public","name":"PM566-bots","owner":"USCbiostats","isFork":false,"description":"","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":null,"participation":[4,8,8,5,7,4,4,5,6,5,4,6,5,5,6,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1],"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-27T00:19:10.236Z"}},{"type":"Public","name":"partition","owner":"USCbiostats","isFork":false,"description":"A fast and flexible framework for data reduction in R","allTopics":["r","data-reduction","dimensionality-reduction","partitional-clustering"],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":1,"starsCount":34,"forksCount":5,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-22T15:45:21.023Z"}},{"type":"Public","name":"annoq-py","owner":"USCbiostats","isFork":false,"description":"Python package for annoq-api-v2","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-08T05:43:42.875Z"}},{"type":"Public","name":"annoq-api-v2","owner":"USCbiostats","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":1,"starsCount":0,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-06T16:37:49.123Z"}},{"type":"Public","name":"PM520","owner":"USCbiostats","isFork":false,"description":"PM520 Advanced Statistical Computing","allTopics":["statistical-computing","jax"],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":7,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-12T17:54:17.369Z"}},{"type":"Public","name":"software-dev","owner":"USCbiostats","isFork":false,"description":"Coding Standards for the USC Biostats group","allTopics":["r","hpc","reproducible-research","standards","reproducibility"],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":2,"starsCount":34,"forksCount":7,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-11T13:01:04.800Z"}},{"type":"Public","name":"ACDC","owner":"USCbiostats","isFork":false,"description":"Association of covariance to detect differential co-expression","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-09T17:59:27.697Z"}},{"type":"Public","name":"PM516","owner":"USCbiostats","isFork":false,"description":"","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-03-28T21:24:22.322Z"}},{"type":"Public","name":"AnnoQR","owner":"USCbiostats","isFork":false,"description":"R client wrap for AnnoQ API","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":3,"starsCount":0,"forksCount":2,"license":"Other","participation":[0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,1,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0],"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-03-13T18:05:05.011Z"}},{"type":"Public","name":"annoq-api","owner":"USCbiostats","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":1,"starsCount":0,"forksCount":0,"license":null,"participation":[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,2,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0],"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-03-07T19:18:43.407Z"}},{"type":"Public","name":"geese-simulations","owner":"USCbiostats","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-16T19:03:02.354Z"}},{"type":"Public","name":"hJAM","owner":"USCbiostats","isFork":false,"description":"hJAM is a hierarchical model which unifies the framework of Mendelian Randomization and Transcriptome-wide association studies.","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":1,"issueCount":1,"starsCount":9,"forksCount":1,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-01-19T22:37:46.190Z"}},{"type":"Public","name":"PM566","owner":"USCbiostats","isFork":false,"description":"USC's Introduction to Health Data Science","allTopics":["data-science","machine-learning","course","dataviz","course-materials","datascience","rstats","webscraping"],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":8,"starsCount":13,"forksCount":26,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-12-19T23:11:00.571Z"}},{"type":"Public","name":".github","owner":"USCbiostats","isFork":false,"description":"Will contain details for our organization's landing page","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-12-13T19:23:43.218Z"}},{"type":"Public","name":"xrnet","owner":"USCbiostats","isFork":false,"description":"R Package for Hierarchical Regularized Regression to Incorporate External Data","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":1,"issueCount":1,"starsCount":10,"forksCount":3,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-28T02:16:20.586Z"}},{"type":"Public","name":"barry","owner":"USCbiostats","isFork":false,"description":"barry: Your go-to motif accountant","allTopics":["motif","ergm","exponential-family","graph","enumeration","counting-statistics","change-statistics"],"primaryLanguage":{"name":"C++","color":"#f34b7d"},"pullRequestCount":0,"issueCount":1,"starsCount":7,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-16T23:49:02.304Z"}},{"type":"Public","name":"PathwayAnalysis","owner":"USCbiostats","isFork":false,"description":"A repository for work under P3 of the renewed P01 award","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-02T20:16:31.333Z"}},{"type":"Public","name":"slurmR","owner":"USCbiostats","isFork":false,"description":"slurmR: A Lightweight Wrapper for Slurm","allTopics":["bioinformatics","hpc","rstats","rpackage","slurm"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":16,"starsCount":53,"forksCount":11,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-10-25T14:59:34.974Z"}},{"type":"Public","name":"aphylo","owner":"USCbiostats","isFork":false,"description":"Statistical inference of genetic functions in phylogenetic trees","allTopics":["r","annotations","inference","phylogenetics","r-package","rcpparmadillo"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":8,"starsCount":6,"forksCount":2,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-10-24T19:07:49.147Z"}},{"type":"Public","name":"geese","owner":"USCbiostats","isFork":false,"description":"GEne-functional Evolutionary model using SufficiEncy","allTopics":["biostatistics","phylogenetics","rstats","rpackage","evolutionary-biology","gene-functions","gene-evolution"],"primaryLanguage":{"name":"C++","color":"#f34b7d"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-10-17T21:01:09.183Z"}},{"type":"Public","name":"PM566-whoami","owner":"USCbiostats","isFork":false,"description":"","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":112,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-09-19T09:33:45.087Z"}},{"type":"Public","name":"fmcmc","owner":"USCbiostats","isFork":false,"description":"A friendly MCMC framework","allTopics":["parallel-computing","adaptive","mcmc","markov-chain-monte-carlo","metropolis-hastings","r","bayesian-inference","r-package"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":1,"issueCount":8,"starsCount":13,"forksCount":7,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-09-18T16:00:36.130Z"}},{"type":"Public","name":"rbootcamp","owner":"USCbiostats","isFork":false,"description":"R boot camp: Scientific Computing","allTopics":["education","tutorial","r","simulation","scientific-computing"],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":5,"starsCount":26,"forksCount":16,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-08-11T15:01:03.762Z"}},{"type":"Public","name":"annoq-cli","owner":"USCbiostats","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-08-07T20:39:42.725Z"}},{"type":"Public","name":"LAsBEST","owner":"USCbiostats","isFork":false,"description":"Repository of USC's LA's BEST program. https://lasbest.usc.edu/","allTopics":["training","education","datascience","biostatistics","rstats","rprogramming","nih"],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":1,"starsCount":1,"forksCount":5,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-07-25T00:18:40.761Z"}},{"type":"Public","name":"BHRM","owner":"USCbiostats","isFork":false,"description":"An R function for mixtures analysis in environmental epidemiology.","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":3,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-06-16T01:24:20.137Z"}}],"repositoryCount":127,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"Repositories"}