{"payload":{"pageCount":2,"repositories":[{"type":"Public","name":"workstation","owner":"JaneliaSciComp","isFork":false,"description":"Janelia Workstation","allTopics":["neuroscience","scientific-computing","neuroimaging","volume-rendering","connectomics","janelia","confocal-microscopy"],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":11,"issueCount":0,"starsCount":21,"forksCount":11,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-31T16:05:39.902Z"}},{"type":"Public","name":"jacs-compute","owner":"JaneliaSciComp","isFork":false,"description":"JAnelia Compute Services (JACS)","allTopics":["distributed-computing","neuroimaging","cluster-computing"],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-31T15:41:10.213Z"}},{"type":"Public","name":"colormipsearch","owner":"JaneliaSciComp","isFork":false,"description":"Distributed Color Depth MIP Search","allTopics":["neuroscience","search-algorithm","neuron"],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":1,"issueCount":0,"starsCount":0,"forksCount":1,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-30T22:12:18.584Z"}},{"type":"Public","name":"Zebrafish_96well_segmentation_mesure_FPC","owner":"JaneliaSciComp","isFork":false,"description":"Zebrafish 2D auto-segmentation & FPC auto-mesurement","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-29T15:16:50.461Z"}},{"type":"Public","name":"jacs-messaging","owner":"JaneliaSciComp","isFork":false,"description":"Provides rabbitmq wrappers and broker base implementation for Neuron shared workspaces in Horta/LVV","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-21T17:16:38.775Z"}},{"type":"Public","name":"BigStitcher-Spark","owner":"JaneliaSciComp","isFork":false,"description":"Running compute-intense parts of BigStitcher distributed","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":1,"issueCount":11,"starsCount":16,"forksCount":9,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-22T08:40:28.533Z"}},{"type":"Public","name":"mipav","owner":"JaneliaSciComp","isFork":false,"description":"MIPAV (Medical Image Processing, Analysis, and Visualization), mirrored from https://citdcbmipav.cit.nih.gov/repos-pub/mipav/","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":1,"issueCount":0,"starsCount":3,"forksCount":2,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-31T20:39:24.987Z"}},{"type":"Public","name":"stitching-spark","owner":"JaneliaSciComp","isFork":true,"description":"Reconstruct big images from overlapping tiled images on a Spark cluster.","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":9,"license":"GNU General Public License v2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-24T13:33:46.678Z"}},{"type":"Public","name":"jacs-model","owner":"JaneliaSciComp","isFork":false,"description":"JACS Domain Model and DAOs","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-31T15:31:17.776Z"}},{"type":"Public","name":"n5-anndata","owner":"JaneliaSciComp","isFork":false,"description":"Convenience functions for reading and writing AnnData files","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-21T21:00:11.442Z"}},{"type":"Public","name":"EM_MIP_search","owner":"JaneliaSciComp","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-08T16:03:57.323Z"}},{"type":"Public","name":"n5-zstandard","owner":"JaneliaSciComp","isFork":false,"description":"Zstandard Compression for N5","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-12-21T05:18:15.123Z"}},{"type":"Public","name":"java-lsf","owner":"JaneliaSciComp","isFork":false,"description":"Java API to IBM Platform LSF","allTopics":["hpc","cluster","lsf","janelia"],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":1,"issueCount":0,"starsCount":3,"forksCount":1,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-12-12T00:29:47.593Z"}},{"type":"Public","name":"n5-inspector","owner":"JaneliaSciComp","isFork":false,"description":"Inspector for NGFF-style containers supported by the N5 API (N5, HDF5, OME-Zarr)","allTopics":["n5","ngff","ome-zarr"],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-14T22:58:57.683Z"}},{"type":"Public","name":"IJava","owner":"JaneliaSciComp","isFork":true,"description":"A Jupyter kernel for executing Java code.","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":208,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-03-06T04:18:50.934Z"}},{"type":"Public","name":"jhdf5-javacpp","owner":"JaneliaSciComp","isFork":false,"description":"JHDF5 adapter for JavaCPP HDF5","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":1,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-08-22T21:20:28.530Z"}},{"type":"Public","name":"tmog","owner":"JaneliaSciComp","isFork":false,"description":"The Janelia Transmogrifier - tmog - supports the collection of meta data associated with files.","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-12-13T14:46:15.336Z"}},{"type":"Public","name":"jacs-storage","owner":"JaneliaSciComp","isFork":false,"description":"JADE file storage services","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":1,"issueCount":0,"starsCount":0,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-05-22T21:36:59.885Z"}},{"type":"Public","name":"janelia-jhdf5","owner":"JaneliaSciComp","isFork":false,"description":"SciJava JHDF5 from Janelia","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-03-11T05:12:07.985Z"}},{"type":"Public","name":"KLEIO-Java-SDK","owner":"JaneliaSciComp","isFork":false,"description":"Versioned Storage Java SDK: Block based versioned data storage. ","allTopics":["java","datastructures","version-control","kleio"],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":5,"forksCount":0,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-03-08T02:46:11.402Z"}},{"type":"Public","name":"BDV-Movie-Producer-Spark","owner":"JaneliaSciComp","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-12-08T16:32:19.161Z"}},{"type":"Public","name":"bigdataviewer-core-movie-producer","owner":"JaneliaSciComp","isFork":true,"description":"ImgLib2-based viewer for registered SPIM stacks and more","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":35,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-12-07T01:51:09.535Z"}},{"type":"Public","name":"HDF5_Vibez","owner":"JaneliaSciComp","isFork":true,"description":"HDF5 plugin for ImageJ and Fiji.","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":9,"license":"GNU General Public License v2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-10-27T22:06:13.791Z"}},{"type":"Public","name":"paintera-versioned","owner":"JaneliaSciComp","isFork":true,"description":"","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":17,"license":"GNU General Public License v2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-10-06T15:26:11.249Z"}},{"type":"Public","name":"sis-base-java","owner":"JaneliaSciComp","isFork":false,"description":"Mirror of https://sissource.ethz.ch/sispub/base","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-09-16T22:25:31.982Z"}},{"type":"Public","name":"jhdf5","owner":"JaneliaSciComp","isFork":false,"description":"Java HDF5 Bindings from https://sissource.ethz.ch/sispub/jhdf5","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":1,"issueCount":2,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-06-07T21:43:29.410Z"}},{"type":"Public","name":"confocal-lens","owner":"JaneliaSciComp","isFork":true,"description":"Correcting lens-distortion in confocal stacks","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-04-21T14:08:18.414Z"}},{"type":"Public","name":"UInt24_to_UInt12_Converter","owner":"JaneliaSciComp","isFork":false,"description":"FIJI ImageJ 1 Plugin to convert 24-bit pixels to 2x 12-bit pixels","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-04-06T01:15:22.864Z"}},{"type":"Public","name":"SurfaceFit","owner":"JaneliaSciComp","isFork":false,"description":"Reimplementation of Dagmars Slab Surface matching using GraphCut","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-03-19T16:11:13.363Z"}},{"type":"Public","name":"BDVShareable","owner":"JaneliaSciComp","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-01-24T17:54:35.753Z"}}],"repositoryCount":44,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"Repositories"}