{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":82891794,"defaultBranch":"master","name":"pairtools","ownerLogin":"open2c","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2017-02-23T06:17:43.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/70977326?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1714742221.0","currentOid":""},"activityList":{"items":[{"before":"bc0d82de95f7b3e905725db87a663bfca6e1ab88","after":"854b1c622820fed01f5f76b1b649b687e013aa48","ref":"refs/heads/fix-scaling-chromsizes","pushedAt":"2024-05-03T15:12:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Phlya","name":"Ilya Flyamer","path":"/Phlya","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2895034?s=80&v=4"},"commit":{"message":"better comment","shortMessageHtmlLink":"better comment"}},{"before":"9c5c77ee14da42dc5e76c875006e9b31786dc7d8","after":"bc0d82de95f7b3e905725db87a663bfca6e1ab88","ref":"refs/heads/fix-scaling-chromsizes","pushedAt":"2024-05-03T14:27:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Phlya","name":"Ilya Flyamer","path":"/Phlya","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2895034?s=80&v=4"},"commit":{"message":"Correct test","shortMessageHtmlLink":"Correct test"}},{"before":null,"after":"9c5c77ee14da42dc5e76c875006e9b31786dc7d8","ref":"refs/heads/fix-scaling-chromsizes","pushedAt":"2024-05-03T13:17:01.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"Phlya","name":"Ilya Flyamer","path":"/Phlya","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2895034?s=80&v=4"},"commit":{"message":"black","shortMessageHtmlLink":"black"}},{"before":"c7c02e60c03818c8448d7f634261e36cf844c313","after":"8c41a26b3f3a3905e307f3baa4b547203394dca1","ref":"refs/heads/master","pushedAt":"2024-04-23T15:38:37.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"golobor","name":"Anton Goloborodko","path":"/golobor","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/912906?s=80&v=4"},"commit":{"message":"Merge pull request #237 from golobor/master\n\nupdate the \"publish\" github action","shortMessageHtmlLink":"Merge pull request #237 from golobor/master"}},{"before":"f88dba603bc09f688a1ff768481efb24d7569418","after":null,"ref":"refs/tags/v1.1.0","pushedAt":"2024-04-23T15:34:39.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"golobor","name":"Anton Goloborodko","path":"/golobor","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/912906?s=80&v=4"}},{"before":"f88dba603bc09f688a1ff768481efb24d7569418","after":"c7c02e60c03818c8448d7f634261e36cf844c313","ref":"refs/heads/master","pushedAt":"2024-04-23T15:31:48.000Z","pushType":"pr_merge","commitsCount":4,"pusher":{"login":"golobor","name":"Anton Goloborodko","path":"/golobor","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/912906?s=80&v=4"},"commit":{"message":"Merge pull request #236 from golobor/master\n\nbump pairtools version and changes.md","shortMessageHtmlLink":"Merge pull request #236 from golobor/master"}},{"before":"b7ab50fc87dafee803f943b6721092d25793d3e6","after":null,"ref":"refs/heads/dups-dist-notebook","pushedAt":"2024-04-23T15:05:29.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"golobor","name":"Anton Goloborodko","path":"/golobor","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/912906?s=80&v=4"}},{"before":"9d99660ce8ffda66486c2b0cc296a6bb814576bf","after":"f88dba603bc09f688a1ff768481efb24d7569418","ref":"refs/heads/master","pushedAt":"2024-04-23T15:05:20.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"golobor","name":"Anton Goloborodko","path":"/golobor","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/912906?s=80&v=4"},"commit":{"message":"Merge pull request #233 from open2c/dups-dist-notebook\n\nDuplicate distance notebook","shortMessageHtmlLink":"Merge pull request #233 from open2c/dups-dist-notebook"}},{"before":"6000a2d9881e2c4b19953cae5113f3836d902cfd","after":"9d99660ce8ffda66486c2b0cc296a6bb814576bf","ref":"refs/heads/master","pushedAt":"2024-04-22T18:48:33.000Z","pushType":"pr_merge","commitsCount":11,"pusher":{"login":"golobor","name":"Anton Goloborodko","path":"/golobor","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/912906?s=80&v=4"},"commit":{"message":"Merge pull request #223 from golobor/parse_refactor\n\nParse refactor","shortMessageHtmlLink":"Merge pull request #223 from golobor/parse_refactor"}},{"before":"0c1a0c73d00dee85e08697a3cabf07f3e4be1792","after":"6000a2d9881e2c4b19953cae5113f3836d902cfd","ref":"refs/heads/master","pushedAt":"2024-04-09T12:58:52.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Phlya","name":"Ilya Flyamer","path":"/Phlya","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2895034?s=80&v=4"},"commit":{"message":"Fix dedup output order for unmapped pairs to the same file","shortMessageHtmlLink":"Fix dedup output order for unmapped pairs to the same file"}},{"before":"cff822645bf2ac82a95d4618b078d824676bb2e3","after":"0c1a0c73d00dee85e08697a3cabf07f3e4be1792","ref":"refs/heads/master","pushedAt":"2024-04-07T14:05:11.000Z","pushType":"pr_merge","commitsCount":20,"pusher":{"login":"golobor","name":"Anton Goloborodko","path":"/golobor","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/912906?s=80&v=4"},"commit":{"message":"Merge pull request #222 from golobor/master\n\nstats: calculate the divergence point and corresponding read fractions","shortMessageHtmlLink":"Merge pull request #222 from golobor/master"}},{"before":null,"after":"b7ab50fc87dafee803f943b6721092d25793d3e6","ref":"refs/heads/dups-dist-notebook","pushedAt":"2024-04-03T12:30:01.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"Phlya","name":"Ilya Flyamer","path":"/Phlya","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2895034?s=80&v=4"},"commit":{"message":"Add first draft","shortMessageHtmlLink":"Add first draft"}},{"before":"d96ce2458605f56b84ef350df0c973374caa4b82","after":"cff822645bf2ac82a95d4618b078d824676bb2e3","ref":"refs/heads/master","pushedAt":"2024-03-28T13:05:17.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"golobor","name":"Anton Goloborodko","path":"/golobor","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/912906?s=80&v=4"},"commit":{"message":"Merge pull request #231 from open2c/golobor-doc-patch\n\nUpdate protocols_pipelines.rst","shortMessageHtmlLink":"Merge pull request #231 from open2c/golobor-doc-patch"}},{"before":null,"after":"8ef47214bfc394c28a8db6c3a99994b08143e673","ref":"refs/heads/golobor-doc-patch","pushedAt":"2024-03-28T11:26:33.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"golobor","name":"Anton Goloborodko","path":"/golobor","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/912906?s=80&v=4"},"commit":{"message":"Update protocols_pipelines.rst","shortMessageHtmlLink":"Update protocols_pipelines.rst"}},{"before":"8b9b04e88b49cbc86b47758bdb61aec26237353f","after":"d96ce2458605f56b84ef350df0c973374caa4b82","ref":"refs/heads/master","pushedAt":"2024-03-28T11:08:12.000Z","pushType":"pr_merge","commitsCount":20,"pusher":{"login":"golobor","name":"Anton Goloborodko","path":"/golobor","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/912906?s=80&v=4"},"commit":{"message":"Merge pull request #226 from golobor/update_docs\n\nupdate docs","shortMessageHtmlLink":"Merge pull request #226 from golobor/update_docs"}},{"before":"f3b19732a725b20ad862b30f53440e7da4d10f3c","after":"8b9b04e88b49cbc86b47758bdb61aec26237353f","ref":"refs/heads/master","pushedAt":"2024-03-27T21:59:17.000Z","pushType":"pr_merge","commitsCount":7,"pusher":{"login":"Phlya","name":"Ilya Flyamer","path":"/Phlya","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2895034?s=80&v=4"},"commit":{"message":"Merge pull request #230 from open2c/fix-dtype-sort\n\nFixing sorting of numerical columns","shortMessageHtmlLink":"Merge pull request #230 from open2c/fix-dtype-sort"}},{"before":"74b17cb413cf045510598d4bd5dbfca878db9be3","after":"ad0c87ee06d313ae15a469d39b8361ff8074d3a1","ref":"refs/heads/fix-dtype-sort","pushedAt":"2024-03-27T21:48:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Phlya","name":"Ilya Flyamer","path":"/Phlya","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2895034?s=80&v=4"},"commit":{"message":"fix test scaling","shortMessageHtmlLink":"fix test scaling"}},{"before":"037ae7f15299e63ab28296d5f29107f92bc4e4d6","after":"74b17cb413cf045510598d4bd5dbfca878db9be3","ref":"refs/heads/fix-dtype-sort","pushedAt":"2024-03-27T21:44:02.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Phlya","name":"Ilya Flyamer","path":"/Phlya","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2895034?s=80&v=4"},"commit":{"message":"fix test merge?","shortMessageHtmlLink":"fix test merge?"}},{"before":"8dd26218bcb45918a9c05263f1b81b50e0618647","after":"037ae7f15299e63ab28296d5f29107f92bc4e4d6","ref":"refs/heads/fix-dtype-sort","pushedAt":"2024-03-27T16:47:12.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Phlya","name":"Ilya Flyamer","path":"/Phlya","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2895034?s=80&v=4"},"commit":{"message":"more ints","shortMessageHtmlLink":"more ints"}},{"before":"3a6bd32c5b49b0492e11cf2ff6a96f1f14daf9bb","after":"8dd26218bcb45918a9c05263f1b81b50e0618647","ref":"refs/heads/fix-dtype-sort","pushedAt":"2024-03-27T16:39:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Phlya","name":"Ilya Flyamer","path":"/Phlya","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2895034?s=80&v=4"},"commit":{"message":"intify positions in test","shortMessageHtmlLink":"intify positions in test"}},{"before":"a479398e1f84ef76581db4e359fec7628d07ebee","after":"3a6bd32c5b49b0492e11cf2ff6a96f1f14daf9bb","ref":"refs/heads/fix-dtype-sort","pushedAt":"2024-03-27T16:31:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Phlya","name":"Ilya Flyamer","path":"/Phlya","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2895034?s=80&v=4"},"commit":{"message":"pairs","shortMessageHtmlLink":"pairs"}},{"before":null,"after":"a479398e1f84ef76581db4e359fec7628d07ebee","ref":"refs/heads/fix-dtype-sort","pushedAt":"2024-03-27T16:30:08.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"Phlya","name":"Ilya Flyamer","path":"/Phlya","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2895034?s=80&v=4"},"commit":{"message":"fix sorting?","shortMessageHtmlLink":"fix sorting?"}},{"before":"b2ee6134227828bbec206ceae16f83856c7a8606","after":null,"ref":"refs/heads/update_docs","pushedAt":"2024-03-26T10:18:47.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"golobor","name":"Anton Goloborodko","path":"/golobor","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/912906?s=80&v=4"}},{"before":null,"after":"b2ee6134227828bbec206ceae16f83856c7a8606","ref":"refs/heads/update_docs","pushedAt":"2024-03-26T10:16:30.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"golobor","name":"Anton Goloborodko","path":"/golobor","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/912906?s=80&v=4"},"commit":{"message":"update phase docs","shortMessageHtmlLink":"update phase docs"}},{"before":"3709de8b34287e293292afffbbc71d9982de6fc2","after":"f3b19732a725b20ad862b30f53440e7da4d10f3c","ref":"refs/heads/master","pushedAt":"2024-03-21T11:32:42.000Z","pushType":"pr_merge","commitsCount":4,"pusher":{"login":"golobor","name":"Anton Goloborodko","path":"/golobor","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/912906?s=80&v=4"},"commit":{"message":"Merge pull request #219 from golobor/master\n\nupdate docs","shortMessageHtmlLink":"Merge pull request #219 from golobor/master"}},{"before":"01efdf20fe41135825f70189c1b0b3d2ff06c049","after":"3709de8b34287e293292afffbbc71d9982de6fc2","ref":"refs/heads/master","pushedAt":"2024-03-21T09:03:47.000Z","pushType":"pr_merge","commitsCount":5,"pusher":{"login":"golobor","name":"Anton Goloborodko","path":"/golobor","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/912906?s=80&v=4"},"commit":{"message":"Merge pull request #218 from golobor/master\n\nupdate phase walkthrough","shortMessageHtmlLink":"Merge pull request #218 from golobor/master"}},{"before":"5b45f29d97b14208fd0228df583e41d848b49cab","after":"01efdf20fe41135825f70189c1b0b3d2ff06c049","ref":"refs/heads/master","pushedAt":"2024-03-20T13:27:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Phlya","name":"Ilya Flyamer","path":"/Phlya","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2895034?s=80&v=4"},"commit":{"message":"Fix order of pairs when saving dups together with nodups, ensure correct headers","shortMessageHtmlLink":"Fix order of pairs when saving dups together with nodups, ensure corr…"}},{"before":"b3c2ce32df878b5f4d27eee94fdfc698bbdb5663","after":"5b45f29d97b14208fd0228df583e41d848b49cab","ref":"refs/heads/master","pushedAt":"2024-03-20T10:13:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Phlya","name":"Ilya Flyamer","path":"/Phlya","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2895034?s=80&v=4"},"commit":{"message":"Fix --keep-parent-id in dedup with no unmapped pairs","shortMessageHtmlLink":"Fix --keep-parent-id in dedup with no unmapped pairs"}},{"before":"91b40fde4b75122ada57492cc1ee5919e2d11a54","after":"b3c2ce32df878b5f4d27eee94fdfc698bbdb5663","ref":"refs/heads/master","pushedAt":"2024-03-17T13:42:22.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"golobor","name":"Anton Goloborodko","path":"/golobor","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/912906?s=80&v=4"},"commit":{"message":"Merge pull request #211 from golobor/master\n\npairtools dedup: turn mark-dups on by default","shortMessageHtmlLink":"Merge pull request #211 from golobor/master"}},{"before":"75cc094a5f3b39ebd1ab061a35d5b16664daba46","after":null,"ref":"refs/heads/dedup-cols","pushedAt":"2024-03-17T13:37:47.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"golobor","name":"Anton Goloborodko","path":"/golobor","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/912906?s=80&v=4"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEQODJMwA","startCursor":null,"endCursor":null}},"title":"Activity · open2c/pairtools"}