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importing rMATS dPSI #433

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herber4 opened this issue Oct 21, 2021 · 1 comment

herber4 commented Oct 21, 2021

Hi Psichomics,

How would I go about getting the dPSI values generated by rMATs into psichomics?

Best,

Austin

Owner

nuno-agostinho commented Oct 22, 2021 •

edited

Hey @herber4! Basically, you need to create a TSV file with a table containing the PSI values like so:

AS Event ID	Sample-18	Sample-03
someASevent001	0.71	0.30
anotherASevent653	0.63	0.37
yetAnother097	0.38	0.62

Please check this page on how to load alternative splicing quantification data from any source in psichomics.

If you have further questions, feel free to ask! :)

Best,
Nuno

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