GitHub - nnoll/tissueAnalysisSuite: A complete set of MATLAB code to segment live-image movies of developing epithelial tissues, track cellular flows, and infer intercellular stresses.

nnoll / tissueAnalysisSuite Public

A complete set of MATLAB code to segment live-image movies of developing epithelial tissues, track cellular flows, and infer intercellular stresses.

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Name		Name	Last commit message	Last commit date
Latest commit History 11 Commits
+MI		+MI
+continuum		+continuum
+embedSpace		+embedSpace
+fitDual		+fitDual
+generate		+generate
+interpolate		+interpolate
+isogonal		+isogonal
+load		+load
+measure		+measure
+plot		+plot
+pressure		+pressure
+save		+save
+seg		+seg
+smooth		+smooth
+track		+track
build		build
miscPipelines		miscPipelines
source		source
.hg_archival.txt		.hg_archival.txt
Makefile		Makefile
calculateDivergence.m		calculateDivergence.m
calculateDivergence2.m		calculateDivergence2.m
compareGrids.m		compareGrids.m
computeMyoStressDiff.m		computeMyoStressDiff.m
corrStressDivAxis.m		corrStressDivAxis.m
drawOnTension.m		drawOnTension.m
findMaxAlphaDelta.m		findMaxAlphaDelta.m
generateBondGrad.m		generateBondGrad.m
generateBondGradientTheta.m		generateBondGradientTheta.m
generateRadialGradient.m		generateRadialGradient.m
generateRadialHessian.m		generateRadialHessian.m
generateRhoGrad.m		generateRhoGrad.m
generateRhoHessian.m		generateRhoHessian.m
generateSyntheticData.m		generateSyntheticData.m
generateUnNormBondGrad.m		generateUnNormBondGrad.m
inferEmbryo.m		inferEmbryo.m
inferSphericalEmbryo.m		inferSphericalEmbryo.m
inversePipeline.m		inversePipeline.m
measureStressDivAxis.m		measureStressDivAxis.m
plot3DScalar.m		plot3DScalar.m
scanGridSize.m		scanGridSize.m
segmentPipeline.m		segmentPipeline.m