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Tedana writes out additional provenance information in the dataset_description.json:
dataset_description.json
{ "BIDSVersion": "1.5.0", "DatasetType": "derivative", "GeneratedBy": [ { "CodeURL": "https://github.com/ME-ICA/tedana", "Command": "tedana -d p05.SBJ01_S09_Task11_e1.in.nii.gz p05.SBJ01_S09_Task11_e2.in.nii.gz p05.SBJ01_S09_Task11_e3.in.nii.gz p05.SBJ01_S09_Task11_e4.in.nii.gz p05.SBJ01_S09_Task11_e5.in.nii.gz -e 15.4 29.7 44.0 58.3 72.6 --out-dir=tedana_out/RobustICA_c80_iter100_minimal --ica_method robustica --n_robust_runs 100 --tedpca=80 --tree minimal", "Description": "A denoising pipeline for the identification and removal of non-BOLD noise from multi-echo fMRI data.", "Name": "tedana", "Node": { "Machine": "arm64", "Name": "x.local", "Processor": "arm", "Release": "22.6.0", "System": "Darwin", "Version": "Darwin Kernel Version 22.6.0: Tue Nov 7 21:40:08 PST 2023; root:xnu-8796.141.3.702.9~2/RELEASE_ARM64_T6000" }, "Python": "3.12.0 | packaged by Anaconda, Inc. | (main, Oct 2 2023, 12:22:05) [Clang 14.0.6 ]", "Version": "23.0.3.dev13+gcc5e05d" } ], "Name": "tedana Outputs" }
Implemented here:
https://github.com/ME-ICA/tedana/blob/bc37e6adb9317059384128be024824fb7c49140f/tedana/workflows/tedana.py#L825-L850
https://github.com/ME-ICA/tedana/blob/bc37e6adb9317059384128be024824fb7c49140f/tedana/utils.py#L446-L463
Could be worth including more information than we currently do.
HT @handwerkerd who posted about this on mattermost.
Yes
No response
The text was updated successfully, but these errors were encountered:
No branches or pull requests
What would you like to see added in fMRIPrep?
Tedana writes out additional provenance information in the
dataset_description.json
:Implemented here:
https://github.com/ME-ICA/tedana/blob/bc37e6adb9317059384128be024824fb7c49140f/tedana/workflows/tedana.py#L825-L850
https://github.com/ME-ICA/tedana/blob/bc37e6adb9317059384128be024824fb7c49140f/tedana/utils.py#L446-L463
Could be worth including more information than we currently do.
HT @handwerkerd who posted about this on mattermost.
Do you have any interest in helping implement the feature?
Yes
Additional information / screenshots
No response
The text was updated successfully, but these errors were encountered: