setup.cfg

[metadata]
author = The NiPreps developers
author_email = nipreps@gmail.com
classifiers =
    Development Status :: 3 - Alpha
    Intended Audience :: Science/Research
    Topic :: Scientific/Engineering :: Image Recognition
    License :: OSI Approved :: Apache Software License
    Programming Language :: Python :: 3.7
    Programming Language :: Python :: 3.8
    Programming Language :: Python :: 3.9
description = dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data.
license = Apache License, Version 2.0
long_description = file:README.rst
long_description_content_type = text/x-rst; charset=UTF-8
name = dmriprep
project_urls =
    Home = https://github.com/nipreps/dmriprep
    Documentation = https://www.nipreps.org/dmriprep

[options]
python_requires = >=3.7
install_requires =
    dipy >=1.0.0
    h5py
    indexed_gzip >=0.8.8
    nibabel ~= 3.0
    nipype >= 1.5.1, < 2.0
    niworkflows >= 1.4.0rc6, <1.5
    numpy
    pybids >= 0.11.1
    pyyaml
    sdcflows ~= 2.0.4
    smriprep >= 0.8.0rc2
    svgutils != 0.3.2
    templateflow ~= 0.6
    toml
setup_requires =
    setuptools >= 40.8.0
test_requires =
    codecov
    coverage
    pytest
packages = find:

[options.packages.find]
exclude =
    *.tests

[options.package_data]
dmriprep =
    VERSION
    config/reports-spec.yml
    data/boilerplate.bib
    data/flirtsch/*.cnf
    data/tests/config.toml
    data/tests/THP/*
    data/tests/THP/sub-THP0005/anat/*
    data/tests/THP/sub-THP0005/dwi/*

[options.exclude_package_data]
* = tests

[options.extras_require]
datalad = datalad
doc =
    nbsphinx
    packaging
    pydot >= 1.2.3
    pydotplus
    sphinx >=2.1.2,<3.0
    sphinx-argparse
    sphinx_rtd_theme
    sphinxcontrib-apidoc ~= 0.3.0
    sphinxcontrib-napoleon
    sphinxcontrib-versioning
docs =
    %(doc)s
duecredit = duecredit
resmon = psutil >=5.4
popylar = popylar >= 0.2
style =
    flake8 >= 3.7.0
test =
    pytest >= 4.4
    pytest-xdist >= 2.0
    pytest-cov >= 2.10.1
    pytest-env
    coverage
tests =
    %(test)s
all =
    %(datalad)s
    %(doc)s
    %(duecredit)s
    %(resmon)s
    %(popylar)s
    %(tests)s

[options.entry_points]
console_scripts =
    dmriprep=dmriprep.cli.run:main

[versioneer]
VCS = git
style = pep440
versionfile_source = dmriprep/_version.py
versionfile_build = dmriprep/_version.py
tag_prefix =
parentdir_prefix =

[flake8]
max-line-length = 99
doctests = False
ignore =
    W503
    E231
    E203
exclude =
    *build/
    docs/sphinxext/
    docs/tools/
per-file-ignores =
    **/__init__.py : F401
    docs/conf.py : E265

[tool:pytest]
norecursedirs = .git
addopts = -vsx --doctest-modules
doctest_optionflags = ALLOW_UNICODE NORMALIZE_WHITESPACE NUMBER
env =
    PYTHONHASHSEED=0
filterwarnings =
    ignore::DeprecationWarning
    ignore::PendingDeprecationWarning
    ignore:cmp not installed:UserWarning
    ignore:This has not been fully tested:UserWarning

[coverage:run]
concurrency = multiprocessing