{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":437831414,"defaultBranch":"master","name":"funcscan","ownerLogin":"nf-core","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2021-12-13T10:35:54.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/35520196?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1716966140.0","currentOid":""},"activityList":{"items":[{"before":"f3698bb958e337b00e2a0dc985c8f9e2163aee57","after":"12833087a0f7398f0aad3aadaecfc7ebcc1bd6d9","ref":"refs/heads/presupplied-orfs-attempt3","pushedAt":"2024-05-29T11:39:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jfy133","name":"James A. Fellows Yates","path":"/jfy133","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17950287?s=80&v=4"},"commit":{"message":"Trying bumping MMSeqs database memory","shortMessageHtmlLink":"Trying bumping MMSeqs database memory"}},{"before":"6ba225baa99db2b0d061d8b84cf80768496674e2","after":"f3698bb958e337b00e2a0dc985c8f9e2163aee57","ref":"refs/heads/presupplied-orfs-attempt3","pushedAt":"2024-05-29T09:31:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jfy133","name":"James A. Fellows Yates","path":"/jfy133","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17950287?s=80&v=4"},"commit":{"message":"Re-add annotation ORFs, everything should be working except the combBGC + taxonomy merge due to wrong sample names","shortMessageHtmlLink":"Re-add annotation ORFs, everything should be working except the combB…"}},{"before":"cab78119c18aee0e4806ab5e70ec286f75b10688","after":"6ba225baa99db2b0d061d8b84cf80768496674e2","ref":"refs/heads/presupplied-orfs-attempt3","pushedAt":"2024-05-29T07:04:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jfy133","name":"James A. Fellows Yates","path":"/jfy133","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17950287?s=80&v=4"},"commit":{"message":"Remove erroneous changelog entry","shortMessageHtmlLink":"Remove erroneous changelog entry"}},{"before":null,"after":"cab78119c18aee0e4806ab5e70ec286f75b10688","ref":"refs/heads/presupplied-orfs-attempt3","pushedAt":"2024-05-29T07:02:20.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"jfy133","name":"James A. Fellows Yates","path":"/jfy133","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17950287?s=80&v=4"},"commit":{"message":"Remove contig splitting add taxonomy fix","shortMessageHtmlLink":"Remove contig splitting add taxonomy fix"}},{"before":"f61f051597ec72e8423583e2c1d1b637930acd68","after":"eb4556b775691c16d880ebeeeca57a075c11ec16","ref":"refs/heads/nf-test-conversion","pushedAt":"2024-05-28T13:30:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jasmezz","name":"Jasmin Frangenberg","path":"/jasmezz","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/73216762?s=80&v=4"},"commit":{"message":"Update test_bakta","shortMessageHtmlLink":"Update test_bakta"}},{"before":"2725c0943d75469302b3a9e5f04f5c1b427be9ee","after":"f61f051597ec72e8423583e2c1d1b637930acd68","ref":"refs/heads/nf-test-conversion","pushedAt":"2024-05-28T13:29:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jasmezz","name":"Jasmin Frangenberg","path":"/jasmezz","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/73216762?s=80&v=4"},"commit":{"message":"Add test_bakta","shortMessageHtmlLink":"Add test_bakta"}},{"before":"dcadba5d171f20e878a4c8b0c211edca5258cb13","after":"2725c0943d75469302b3a9e5f04f5c1b427be9ee","ref":"refs/heads/nf-test-conversion","pushedAt":"2024-05-27T13:41:42.000Z","pushType":"push","commitsCount":15,"pusher":{"login":"Darcy220606","name":"Anan Ibrahim","path":"/Darcy220606","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/81744003?s=80&v=4"},"commit":{"message":"add taxonomy nftest","shortMessageHtmlLink":"add taxonomy nftest"}},{"before":"b9944d6d3d43a6f626c44a3fd0c2baa799fbc9b9","after":"3116c06f3105b6aeb1f1bbee89693e4db2b7e08f","ref":"refs/heads/add_ampcombi2","pushedAt":"2024-05-27T13:37:26.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Darcy220606","name":"Anan Ibrahim","path":"/Darcy220606","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/81744003?s=80&v=4"},"commit":{"message":"edit output.md","shortMessageHtmlLink":"edit output.md"}},{"before":"852ee9de7218d533b4776f3252d3e5bd2a8c0155","after":"b9944d6d3d43a6f626c44a3fd0c2baa799fbc9b9","ref":"refs/heads/add_ampcombi2","pushedAt":"2024-05-24T12:53:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Darcy220606","name":"Anan Ibrahim","path":"/Darcy220606","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/81744003?s=80&v=4"},"commit":{"message":"fill schema.json","shortMessageHtmlLink":"fill schema.json"}},{"before":"8f1c7ba245a57fbd4af9ad23f7d0f0ec0ea32c20","after":"852ee9de7218d533b4776f3252d3e5bd2a8c0155","ref":"refs/heads/add_ampcombi2","pushedAt":"2024-05-24T12:01:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Darcy220606","name":"Anan Ibrahim","path":"/Darcy220606","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/81744003?s=80&v=4"},"commit":{"message":"add ampcombi2","shortMessageHtmlLink":"add ampcombi2"}},{"before":"2d8b238308c4b3b61df1bd773ee48b25dfbb8a0b","after":null,"ref":"refs/heads/add_ampcombi_0.2","pushedAt":"2024-05-24T10:50:12.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"Darcy220606","name":"Anan Ibrahim","path":"/Darcy220606","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/81744003?s=80&v=4"}},{"before":null,"after":"8f1c7ba245a57fbd4af9ad23f7d0f0ec0ea32c20","ref":"refs/heads/add_ampcombi2","pushedAt":"2024-05-24T10:49:55.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"Darcy220606","name":"Anan Ibrahim","path":"/Darcy220606","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/81744003?s=80&v=4"},"commit":{"message":"Fix linting","shortMessageHtmlLink":"Fix linting"}},{"before":"2d8b238308c4b3b61df1bd773ee48b25dfbb8a0b","after":null,"ref":"refs/heads/add_ampcombi","pushedAt":"2024-05-24T10:46:09.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"Darcy220606","name":"Anan Ibrahim","path":"/Darcy220606","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/81744003?s=80&v=4"}},{"before":null,"after":"2d8b238308c4b3b61df1bd773ee48b25dfbb8a0b","ref":"refs/heads/add_ampcombi_0.2","pushedAt":"2024-05-24T10:46:08.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"Darcy220606","name":"Anan Ibrahim","path":"/Darcy220606","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/81744003?s=80&v=4"},"commit":{"message":"Make it so deepBGC actually produces otutput, and START send only long fastas taxonom results to BGC","shortMessageHtmlLink":"Make it so deepBGC actually produces otutput, and START send only lon…"}},{"before":null,"after":"2d8b238308c4b3b61df1bd773ee48b25dfbb8a0b","ref":"refs/heads/add_ampcombi","pushedAt":"2024-05-24T10:45:34.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"Darcy220606","name":"Anan Ibrahim","path":"/Darcy220606","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/81744003?s=80&v=4"},"commit":{"message":"Make it so deepBGC actually produces otutput, and START send only long fastas taxonom results to BGC","shortMessageHtmlLink":"Make it so deepBGC actually produces otutput, and START send only lon…"}},{"before":"8d909fbc87000e81704c0be6073f8765c4141293","after":"dcadba5d171f20e878a4c8b0c211edca5258cb13","ref":"refs/heads/nf-test-conversion","pushedAt":"2024-05-22T15:29:00.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jasmezz","name":"Jasmin Frangenberg","path":"/jasmezz","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/73216762?s=80&v=4"},"commit":{"message":"Fix test_pyrodigal, add test_prokka","shortMessageHtmlLink":"Fix test_pyrodigal, add test_prokka"}},{"before":"8f1c7ba245a57fbd4af9ad23f7d0f0ec0ea32c20","after":"2d8b238308c4b3b61df1bd773ee48b25dfbb8a0b","ref":"refs/heads/presupplied-orfs","pushedAt":"2024-05-22T14:00:43.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jfy133","name":"James A. Fellows Yates","path":"/jfy133","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17950287?s=80&v=4"},"commit":{"message":"Make it so deepBGC actually produces otutput, and START send only long fastas taxonom results to BGC","shortMessageHtmlLink":"Make it so deepBGC actually produces otutput, and START send only lon…"}},{"before":"d1d0177d9caa5148b6a896106ea0733dc32c7d92","after":"8f1c7ba245a57fbd4af9ad23f7d0f0ec0ea32c20","ref":"refs/heads/presupplied-orfs","pushedAt":"2024-05-22T10:21:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jfy133","name":"James A. Fellows Yates","path":"/jfy133","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17950287?s=80&v=4"},"commit":{"message":"Fix linting","shortMessageHtmlLink":"Fix linting"}},{"before":"c419ce9cca8709c1b45d8542e3e48bcdf360f2ab","after":"d1d0177d9caa5148b6a896106ea0733dc32c7d92","ref":"refs/heads/presupplied-orfs","pushedAt":"2024-05-22T10:10:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jfy133","name":"James A. Fellows Yates","path":"/jfy133","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17950287?s=80&v=4"},"commit":{"message":"Fix prokka annotation MQC collection","shortMessageHtmlLink":"Fix prokka annotation MQC collection"}},{"before":"58787f6382e95b4bd3312ca1003f6551db9f4171","after":"c419ce9cca8709c1b45d8542e3e48bcdf360f2ab","ref":"refs/heads/presupplied-orfs","pushedAt":"2024-05-22T09:12:07.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"jfy133","name":"James A. Fellows Yates","path":"/jfy133","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17950287?s=80&v=4"},"commit":{"message":"Fix taxonomy workflow from possibly getting async between two input channels for CREATETSV","shortMessageHtmlLink":"Fix taxonomy workflow from possibly getting async between two input c…"}},{"before":"8fb57b5a36a63fd4d9f92a21fcd2fa51f0a8bf20","after":null,"ref":"refs/heads/fix-rgi-mv-fail","pushedAt":"2024-05-16T12:35:50.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"jfy133","name":"James A. Fellows Yates","path":"/jfy133","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17950287?s=80&v=4"}},{"before":"e525c30f2af77e2f45871d874f8c1d0b64fedd5b","after":"0d762389146b294af6edb835fbc3fab107c5ceeb","ref":"refs/heads/dev","pushedAt":"2024-05-16T12:35:49.000Z","pushType":"pr_merge","commitsCount":4,"pusher":{"login":"jfy133","name":"James A. Fellows Yates","path":"/jfy133","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17950287?s=80&v=4"},"commit":{"message":"Merge pull request #377 from nf-core/fix-rgi-mv-fail\n\nFix RGI fail","shortMessageHtmlLink":"Merge pull request #377 from nf-core/fix-rgi-mv-fail"}},{"before":"af088336700afbef08cc7e5105c920e51a7e5509","after":"8fb57b5a36a63fd4d9f92a21fcd2fa51f0a8bf20","ref":"refs/heads/fix-rgi-mv-fail","pushedAt":"2024-05-16T11:08:07.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jfy133","name":"James A. Fellows Yates","path":"/jfy133","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17950287?s=80&v=4"},"commit":{"message":"Better version","shortMessageHtmlLink":"Better version"}},{"before":"1f077714091638fc4cdef43d04b3c2f14ca7ae2e","after":"af088336700afbef08cc7e5105c920e51a7e5509","ref":"refs/heads/fix-rgi-mv-fail","pushedAt":"2024-05-15T12:16:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jfy133","name":"James A. Fellows Yates","path":"/jfy133","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17950287?s=80&v=4"},"commit":{"message":"Fix changelog","shortMessageHtmlLink":"Fix changelog"}},{"before":null,"after":"1f077714091638fc4cdef43d04b3c2f14ca7ae2e","ref":"refs/heads/fix-rgi-mv-fail","pushedAt":"2024-05-15T12:15:01.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"jfy133","name":"James A. Fellows Yates","path":"/jfy133","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17950287?s=80&v=4"},"commit":{"message":"Fix intermittant RGI process fail when certain files not produced","shortMessageHtmlLink":"Fix intermittant RGI process fail when certain files not produced"}},{"before":"b11bed10e83c81924a1116934a8fd8363d596a35","after":"58787f6382e95b4bd3312ca1003f6551db9f4171","ref":"refs/heads/presupplied-orfs","pushedAt":"2024-05-15T12:10:36.000Z","pushType":"push","commitsCount":27,"pusher":{"login":"jfy133","name":"James A. Fellows Yates","path":"/jfy133","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17950287?s=80&v=4"},"commit":{"message":"Merge branch 'dev' into presupplied-orfs","shortMessageHtmlLink":"Merge branch 'dev' into presupplied-orfs"}},{"before":"5ad3cdef144bcaedd5023febdbbbd61e9f663980","after":null,"ref":"refs/heads/nf-core-template-merge-2.14.1","pushedAt":"2024-05-15T11:50:21.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"jfy133","name":"James A. Fellows Yates","path":"/jfy133","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17950287?s=80&v=4"}},{"before":"f63f569c551e5a56f2f476301b598d00ec604da0","after":"e525c30f2af77e2f45871d874f8c1d0b64fedd5b","ref":"refs/heads/dev","pushedAt":"2024-05-15T11:50:20.000Z","pushType":"pr_merge","commitsCount":8,"pusher":{"login":"jfy133","name":"James A. Fellows Yates","path":"/jfy133","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17950287?s=80&v=4"},"commit":{"message":"Merge pull request #375 from nf-core/nf-core-template-merge-2.14.1\n\nImportant! Template update for nf-core/tools v2.14.1","shortMessageHtmlLink":"Merge pull request #375 from nf-core/nf-core-template-merge-2.14.1"}},{"before":"48c0cd4164724e090b15b636b438e0af5ac8551a","after":"5ad3cdef144bcaedd5023febdbbbd61e9f663980","ref":"refs/heads/nf-core-template-merge-2.14.1","pushedAt":"2024-05-15T10:25:12.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jfy133","name":"James A. Fellows Yates","path":"/jfy133","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17950287?s=80&v=4"},"commit":{"message":"Remove leftover nf-test testing cruft","shortMessageHtmlLink":"Remove leftover nf-test testing cruft"}},{"before":"421a6d474562b55e24a8337cc8f77ecce42268f6","after":"48c0cd4164724e090b15b636b438e0af5ac8551a","ref":"refs/heads/nf-core-template-merge-2.14.1","pushedAt":"2024-05-15T10:07:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jfy133","name":"James A. Fellows Yates","path":"/jfy133","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17950287?s=80&v=4"},"commit":{"message":"Update changelog","shortMessageHtmlLink":"Update changelog"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEVt8VRAA","startCursor":null,"endCursor":null}},"title":"Activity · nf-core/funcscan"}