{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":663649674,"defaultBranch":"main","name":"yQTLpipeline","ownerLogin":"montilab","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-07-07T19:43:07.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/52213315?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1712928963.0","currentOid":""},"activityList":{"items":[{"before":"59e0857db1313de51dcfdd4e688cccce78ae56ba","after":"efe8b35ae483f14cd5698575bb8e0f88988af48c","ref":"refs/heads/main","pushedAt":"2024-04-12T20:00:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"update example file path","shortMessageHtmlLink":"update example file path"}},{"before":"9e4a75bf725d2b2a12c746754af83e9eac726b0a","after":"59e0857db1313de51dcfdd4e688cccce78ae56ba","ref":"refs/heads/main","pushedAt":"2024-04-12T19:56:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"update the direction to run the pipeline","shortMessageHtmlLink":"update the direction to run the pipeline"}},{"before":"c73ec80b6e4a29dcb9d30b6b6b2c989a0883456b","after":"9e4a75bf725d2b2a12c746754af83e9eac726b0a","ref":"refs/heads/main","pushedAt":"2024-04-12T19:43:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"Update README.md\n\nall changes are due to grammar and formatting. no changes in content.","shortMessageHtmlLink":"Update README.md"}},{"before":"5aeb03ad8a4e7bc387dc58b274d7d2cbd186a7b0","after":"c73ec80b6e4a29dcb9d30b6b6b2c989a0883456b","ref":"refs/heads/main","pushedAt":"2024-04-12T14:05:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"tetomonti","name":null,"path":"/tetomonti","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9437983?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"fff50fc73ea7ddf7ae405d962e9e00f4c4c97524","after":"5aeb03ad8a4e7bc387dc58b274d7d2cbd186a7b0","ref":"refs/heads/main","pushedAt":"2024-04-12T13:44:16.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"tetomonti","name":null,"path":"/tetomonti","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9437983?s=80&v=4"},"commit":{"message":"Added DOI badge","shortMessageHtmlLink":"Added DOI badge"}},{"before":"92474a62b8f507e9088397b0ea1fbe920c55271b","after":"fff50fc73ea7ddf7ae405d962e9e00f4c4c97524","ref":"refs/heads/main","pushedAt":"2024-04-05T19:52:35.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"fix factor covariate level when there is NA","shortMessageHtmlLink":"fix factor covariate level when there is NA"}},{"before":"28593ab5bac4ea0747630ab5e3f01a7b4bb2f9d1","after":"92474a62b8f507e9088397b0ea1fbe920c55271b","ref":"refs/heads/main","pushedAt":"2024-04-01T20:04:43.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"update output messages for plots","shortMessageHtmlLink":"update output messages for plots"}},{"before":"ae5a34a117ac11e02818bf29b11d0216e4164234","after":"28593ab5bac4ea0747630ab5e3f01a7b4bb2f9d1","ref":"refs/heads/main","pushedAt":"2024-03-28T22:27:32.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"add gds snp id preview","shortMessageHtmlLink":"add gds snp id preview"}},{"before":"928c7288026ff0ccb8e02fe33a8da674987c0308","after":"ae5a34a117ac11e02818bf29b11d0216e4164234","ref":"refs/heads/main","pushedAt":"2024-03-23T02:26:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"update Readme figure","shortMessageHtmlLink":"update Readme figure"}},{"before":"1e279f6816d467f707870aa939f858fb7c26f9f2","after":"928c7288026ff0ccb8e02fe33a8da674987c0308","ref":"refs/heads/main","pushedAt":"2024-03-23T02:24:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"update Readme figure","shortMessageHtmlLink":"update Readme figure"}},{"before":"7fa80dd039d3d11fcc1c9408e446b37285a48d15","after":"1e279f6816d467f707870aa939f858fb7c26f9f2","ref":"refs/heads/main","pushedAt":"2024-03-23T02:20:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"fix link","shortMessageHtmlLink":"fix link"}},{"before":"f7f2f68cf7d98afc9a1536c03a64df90dcc7e47d","after":"7fa80dd039d3d11fcc1c9408e446b37285a48d15","ref":"refs/heads/main","pushedAt":"2024-03-23T02:16:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"fix link","shortMessageHtmlLink":"fix link"}},{"before":"20087dd6137eaacfea2af391a92d39253ab056cf","after":"f7f2f68cf7d98afc9a1536c03a64df90dcc7e47d","ref":"refs/heads/main","pushedAt":"2024-03-23T02:12:03.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"update Readme, add Shiny description","shortMessageHtmlLink":"update Readme, add Shiny description"}},{"before":"814a3dc93fa5e1f7ad28e46ec6af0a3be24d3f95","after":"20087dd6137eaacfea2af391a92d39253ab056cf","ref":"refs/heads/main","pushedAt":"2024-03-22T15:09:14.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"update generate example config to include new parameter","shortMessageHtmlLink":"update generate example config to include new parameter"}},{"before":"729794952863160bf32ca3e994c0d22dcc527a5c","after":"814a3dc93fa5e1f7ad28e46ec6af0a3be24d3f95","ref":"refs/heads/main","pushedAt":"2024-03-20T18:23:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"update config example","shortMessageHtmlLink":"update config example"}},{"before":"cf33a80736f87612537441bb1d4be6a2318e40be","after":"729794952863160bf32ca3e994c0d22dcc527a5c","ref":"refs/heads/main","pushedAt":"2024-03-19T19:14:48.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"PreQC example config","shortMessageHtmlLink":"PreQC example config"}},{"before":"09e4886bb856d4534abcfb2c719bf1d15dbc8ba9","after":"cf33a80736f87612537441bb1d4be6a2318e40be","ref":"refs/heads/main","pushedAt":"2024-03-19T03:57:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"tab title change","shortMessageHtmlLink":"tab title change"}},{"before":"8efb009b229b1cbd8cfa80ce0bb1e0faba556002","after":"09e4886bb856d4534abcfb2c719bf1d15dbc8ba9","ref":"refs/heads/main","pushedAt":"2024-03-19T03:55:59.000Z","pushType":"push","commitsCount":5,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"rename input id to be exclusive for each tab","shortMessageHtmlLink":"rename input id to be exclusive for each tab"}},{"before":"570db111695b9c61a34d439d1047c506f6b575e8","after":"8efb009b229b1cbd8cfa80ce0bb1e0faba556002","ref":"refs/heads/main","pushedAt":"2024-03-13T21:36:41.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"genesis - plot genotype-phenotype boxplot","shortMessageHtmlLink":"genesis - plot genotype-phenotype boxplot"}},{"before":"5c6bb220dd65813ece5fdfad4bb737cd85c3ece4","after":"570db111695b9c61a34d439d1047c506f6b575e8","ref":"refs/heads/main","pushedAt":"2024-03-11T23:08:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"mateqtl - plot genotype-phenotype boxplot\n\nplot the boxplot during 3_M_matQTL process. later in Report.nf, move it to 5_Results_Summary folder","shortMessageHtmlLink":"mateqtl - plot genotype-phenotype boxplot"}},{"before":"84264a34bdcfbd3b2b5d4559fd1c1b0610ed7eb9","after":"5c6bb220dd65813ece5fdfad4bb737cd85c3ece4","ref":"refs/heads/main","pushedAt":"2024-03-11T19:11:26.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"add Miami plot","shortMessageHtmlLink":"add Miami plot"}},{"before":"57c17809e3fcacb815068dcafeb637e85a2ab714","after":"84264a34bdcfbd3b2b5d4559fd1c1b0610ed7eb9","ref":"refs/heads/main","pushedAt":"2024-02-27T21:56:34.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"update messages to make the log more readable","shortMessageHtmlLink":"update messages to make the log more readable"}},{"before":"630a155dff52afebcecf998a9a2c5fbfb28dc357","after":"57c17809e3fcacb815068dcafeb637e85a2ab714","ref":"refs/heads/main","pushedAt":"2024-02-21T16:36:30.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"update PCA snpset description","shortMessageHtmlLink":"update PCA snpset description"}},{"before":"8354923e1efc4f1b47368d81ff92dcd2e1f02de7","after":"630a155dff52afebcecf998a9a2c5fbfb28dc357","ref":"refs/heads/main","pushedAt":"2024-01-30T18:56:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"tetomonti","name":null,"path":"/tetomonti","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9437983?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"8a6e3e6973eda30a18ae7b36cb221acbe3110767","after":"8354923e1efc4f1b47368d81ff92dcd2e1f02de7","ref":"refs/heads/main","pushedAt":"2024-01-30T17:50:55.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"tetomonti","name":null,"path":"/tetomonti","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9437983?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"d8ff4efbfcaae07280d6deeedac71761736f9002","after":"8a6e3e6973eda30a18ae7b36cb221acbe3110767","ref":"refs/heads/main","pushedAt":"2024-01-17T22:16:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"Upload Shiny App scripts","shortMessageHtmlLink":"Upload Shiny App scripts"}},{"before":"42a6d5a3183414464ad5bfa02b120eeed0aa0d0d","after":"d8ff4efbfcaae07280d6deeedac71761736f9002","ref":"refs/heads/main","pushedAt":"2023-08-15T17:28:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"dplyr function updated","shortMessageHtmlLink":"dplyr function updated"}},{"before":"df9a870569a71d34e27d5fef78d8f97c4dc80d0e","after":"42a6d5a3183414464ad5bfa02b120eeed0aa0d0d","ref":"refs/heads/main","pushedAt":"2023-08-03T14:52:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"nullmod save warning","shortMessageHtmlLink":"nullmod save warning"}},{"before":"473735b92d59abc9cb7d0fd0c8ef9a35ea67bbce","after":"df9a870569a71d34e27d5fef78d8f97c4dc80d0e","ref":"refs/heads/main","pushedAt":"2023-07-28T19:41:17.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"Update Readme\n\nModify some descriptions. Include a TOC.","shortMessageHtmlLink":"Update Readme"}},{"before":"36dd1a86f3e2cafc2f4cf2c2aebde383096d40f8","after":"473735b92d59abc9cb7d0fd0c8ef9a35ea67bbce","ref":"refs/heads/main","pushedAt":"2023-07-10T20:58:16.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"Vanessa104","name":"Mengze Li (Vanessa)","path":"/Vanessa104","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56649879?s=80&v=4"},"commit":{"message":"Add example, update example input data","shortMessageHtmlLink":"Add example, update example input data"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEL23DPgA","startCursor":null,"endCursor":null}},"title":"Activity ยท montilab/yQTLpipeline"}