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network.diffc restricted to custom set of nodes/genes #2

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tetomonti opened this issue Apr 4, 2022 · 0 comments
Open

network.diffc restricted to custom set of nodes/genes #2

tetomonti opened this issue Apr 4, 2022 · 0 comments

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@tetomonti
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It would be useful if, when calling network.diffc, one could specify the set of nodes/genes to which restrict the comparison. E.g., I might be interested in comparing the differential connectivity of kinases only, so, it would be great if the comparison and visualization was restricted to those entities only. I.e.,

network.diffc(yeast.networks, metric="eigen", top=25, p=5, nodeset=kinases)

where kinases would be a character vector of identifiers.
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@tetomonti