Show RO:0004029 associations from Mondo in Phenotype associations section

[kevinschaper]

We disease to phenotype associations in Mondo that we're not showing on the site right now, because they're not getting the right category and predicate.

examples:

category	subject	subject_label	predicate	object_label	object
biolink:Association	MONDO:0000986	pleurisy	biolink:related_to	Pneumonia	HP:0002090
biolink:Association	MONDO:0000986	pleurisy	biolink:related_to	Pleuritis	HP:0002102
biolink:Association	MONDO:0000986	pleurisy	biolink:related_to	Systemic lupus erythematosus	HP:0002725
biolink:Association	MONDO:0000986	pleurisy	biolink:related_to	Pulmonary embolism	HP:0002204
biolink:Association	MONDO:0000321	typhoidal tularemia	biolink:related_to	Weight loss	HP:0001824
biolink:Association	MONDO:0000333	early congenital syphilis	biolink:related_to	Seizure	HP:0001250
biolink:Association	MONDO:0000333	early congenital syphilis	biolink:related_to	Hepatosplenomegaly	HP:0001433
biolink:Association	MONDO:0000463	Ochoa syndrome	biolink:related_to	Neurogenic bladder	HP:0000011
biolink:Association	MONDO:0000490	glomerulosclerosis	biolink:related_to	Glomerular sclerosis	HP:0000096
biolink:Association	MONDO:0000875	adult acute monocytic leukemia	biolink:related_to	Adult onset	HP:0003581

Ideally, these should wind up with:

category: biolink:DiseaseToPhenotypicFeatureAssociation
predicate: biolink:has_phenotype

I created a biolink PR that should take care of the predicate (assuming kgx will use the narrow mapping?), but it's important to also make sure we populate the category with biolink:DiseaseToPhenotypicFeatureAssociation - I don't know how practical is to populate categories based on predicate + domain & range? What do you think @caufieldjh

[caufieldjh]

Looking into it. To show these in the Monarch interface, is it enough to just have the has_phenotype predicate? I'm guessing it is not