{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":296442136,"defaultBranch":"main","name":"TDC","ownerLogin":"mims-harvard","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2020-09-17T21:04:59.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/60720343?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1716303976.0","currentOid":""},"activityList":{"items":[{"before":"f9c70c454f98d36741e1a309262fcbe76539d3d0","after":"a23a4a9ebbd476b5c3bc6099974e1b32c5cee282","ref":"refs/heads/main","pushedAt":"2024-05-24T21:36:17.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kexinhuang12345","name":"Kexin Huang","path":"/kexinhuang12345","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/27795075?s=80&v=4"},"commit":{"message":"fix bug","shortMessageHtmlLink":"fix bug"}},{"before":"a13e47d78d94e12784f49d139c5414a4e7428cb9","after":"f9c70c454f98d36741e1a309262fcbe76539d3d0","ref":"refs/heads/main","pushedAt":"2024-05-23T22:17:32.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"Merge pull request #273 from mims-harvard/neurips_benchmarks\n\ntcrepitope benchmark","shortMessageHtmlLink":"Merge pull request #273 from mims-harvard/neurips_benchmarks"}},{"before":"4a67b43a45e9c0411b7165ee26101fe19c0937b5","after":"6fcc8a5ad310d52c8a6dc92ae1d0399220f4502d","ref":"refs/heads/neurips_benchmarks","pushedAt":"2024-05-23T22:05:57.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"mend","shortMessageHtmlLink":"mend"}},{"before":"9275e4f3b5cfddc01c94c38ee6ab2502053afbc9","after":"4a67b43a45e9c0411b7165ee26101fe19c0937b5","ref":"refs/heads/neurips_benchmarks","pushedAt":"2024-05-23T22:01:48.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"tcrepitope benchmark","shortMessageHtmlLink":"tcrepitope benchmark"}},{"before":"2ac37065c58906db5941a0e5e399afab58b8ea6a","after":"a13e47d78d94e12784f49d139c5414a4e7428cb9","ref":"refs/heads/main","pushedAt":"2024-05-23T20:54:39.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"Merge pull request #272 from mims-harvard/neurips_benchmarks\n\nNeurips benchmarks -- add tchard dataset along with hard splits","shortMessageHtmlLink":"Merge pull request #272 from mims-harvard/neurips_benchmarks"}},{"before":"b63d35a2ae1ecf04b6ee9f74ca1c52783d62bca6","after":"9275e4f3b5cfddc01c94c38ee6ab2502053afbc9","ref":"refs/heads/neurips_benchmarks","pushedAt":"2024-05-23T20:37:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"tchard dataloader","shortMessageHtmlLink":"tchard dataloader"}},{"before":"afbdf8be71ae113a82f2bd272cc3919c4c675062","after":"b63d35a2ae1ecf04b6ee9f74ca1c52783d62bca6","ref":"refs/heads/neurips_benchmarks","pushedAt":"2024-05-23T19:31:25.000Z","pushType":"push","commitsCount":32,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"add tchard metadata","shortMessageHtmlLink":"add tchard metadata"}},{"before":"4857e0efc3a838bd71ffb31380d7949584a8413a","after":"2ac37065c58906db5941a0e5e399afab58b8ea6a","ref":"refs/heads/main","pushedAt":"2024-05-23T16:58:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"new version","shortMessageHtmlLink":"new version"}},{"before":"dcc7537656fee3da6232976c4cafa1fda5112091","after":"294afce4a1692a71c51b3a5a55b51212df3296c5","ref":"refs/heads/gh-pages","pushedAt":"2024-05-23T00:35:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"Update index.html","shortMessageHtmlLink":"Update index.html"}},{"before":"47a867dddef171ecc73c24c6e4a51b45a326d188","after":"4857e0efc3a838bd71ffb31380d7949584a8413a","ref":"refs/heads/main","pushedAt":"2024-05-22T05:13:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kexinhuang12345","name":"Kexin Huang","path":"/kexinhuang12345","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/27795075?s=80&v=4"},"commit":{"message":"add gears example code","shortMessageHtmlLink":"add gears example code"}},{"before":"eb397e3af5d80572e511cb2227feee55204dd31a","after":"47a867dddef171ecc73c24c6e4a51b45a326d188","ref":"refs/heads/main","pushedAt":"2024-05-21T20:07:51.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"Merge pull request #270 from mims-harvard/bug_fixes_perturb\n\nfilter out unseen","shortMessageHtmlLink":"Merge pull request #270 from mims-harvard/bug_fixes_perturb"}},{"before":"eb397e3af5d80572e511cb2227feee55204dd31a","after":"666e5be1b2afed2892c22e2b73d3503b599503a7","ref":"refs/heads/bug_fixes_perturb","pushedAt":"2024-05-21T19:42:12.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"filter out unseen","shortMessageHtmlLink":"filter out unseen"}},{"before":"930ed1841d58d5adb7b5dfb951f7340013fc757d","after":"eb397e3af5d80572e511cb2227feee55204dd31a","ref":"refs/heads/bug_fixes_perturb","pushedAt":"2024-05-21T15:30:27.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"Merge pull request #269 from mims-harvard/bug_fixes_perturb\n\nFixes perturb gene","shortMessageHtmlLink":"Merge pull request #269 from mims-harvard/bug_fixes_perturb"}},{"before":"a8c8d8ccd30357d2bc1b44d60a257fcab273e147","after":"eb397e3af5d80572e511cb2227feee55204dd31a","ref":"refs/heads/main","pushedAt":"2024-05-21T15:20:33.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"Merge pull request #269 from mims-harvard/bug_fixes_perturb\n\nFixes perturb gene","shortMessageHtmlLink":"Merge pull request #269 from mims-harvard/bug_fixes_perturb"}},{"before":null,"after":"930ed1841d58d5adb7b5dfb951f7340013fc757d","ref":"refs/heads/bug_fixes_perturb","pushedAt":"2024-05-21T15:06:16.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"mend","shortMessageHtmlLink":"mend"}},{"before":"dfb9bb6b04565d90fa6febfae4f9423ebd393e80","after":"dcc7537656fee3da6232976c4cafa1fda5112091","ref":"refs/heads/gh-pages","pushedAt":"2024-05-20T16:54:25.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"Update index.html","shortMessageHtmlLink":"Update index.html"}},{"before":null,"after":"d948415dac7d44e7b9dfe0d741e9b2dd8323fd94","ref":"refs/heads/gene_perturb_benchmark","pushedAt":"2024-05-20T05:29:41.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"kexinhuang12345","name":"Kexin Huang","path":"/kexinhuang12345","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/27795075?s=80&v=4"},"commit":{"message":"add gene perturb code","shortMessageHtmlLink":"add gene perturb code"}},{"before":"9f10ee583da01bd19b2190297d8e02d0d481f4ea","after":"a8c8d8ccd30357d2bc1b44d60a257fcab273e147","ref":"refs/heads/main","pushedAt":"2024-05-18T21:24:42.000Z","pushType":"pr_merge","commitsCount":22,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"Merge pull request #266 from mims-harvard/package_release\n\nadd primekg test","shortMessageHtmlLink":"Merge pull request #266 from mims-harvard/package_release"}},{"before":"ed1c20d11310d1d9148fb039a42e3e805b0abdc4","after":"048eca4eb33d80f3668dcad86d72c36f6f7ff437","ref":"refs/heads/package_release","pushedAt":"2024-05-18T21:13:48.000Z","pushType":"push","commitsCount":20,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"merge primekg dev","shortMessageHtmlLink":"merge primekg dev"}},{"before":"6e051cac801fa52cba8388f342b3eab18b7ce482","after":"ed1c20d11310d1d9148fb039a42e3e805b0abdc4","ref":"refs/heads/package_release","pushedAt":"2024-05-18T20:52:51.000Z","pushType":"push","commitsCount":17,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"mend","shortMessageHtmlLink":"mend"}},{"before":"fa5b61057da462c7cac1819e48e18f3b939cff97","after":"9f10ee583da01bd19b2190297d8e02d0d481f4ea","ref":"refs/heads/main","pushedAt":"2024-05-18T16:46:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"bump version","shortMessageHtmlLink":"bump version"}},{"before":"d736a6538b3a548d2c725f194629868df3f1d819","after":"fa5b61057da462c7cac1819e48e18f3b939cff97","ref":"refs/heads/main","pushedAt":"2024-05-18T16:35:18.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"Merge pull request #265 from mims-harvard/neurips_benchmarks\n\nNeurips benchmarks -- complete cell line and perturbation splits on the benchmark for perturb outcome","shortMessageHtmlLink":"Merge pull request #265 from mims-harvard/neurips_benchmarks"}},{"before":"0f00e06b58aca1b6e9976152121c7a4e3e6bec47","after":"afbdf8be71ae113a82f2bd272cc3919c4c675062","ref":"refs/heads/neurips_benchmarks","pushedAt":"2024-05-18T16:23:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"mend","shortMessageHtmlLink":"mend"}},{"before":"f2969bb319592a3e2bedaedcb22b3460cf9f6644","after":"0f00e06b58aca1b6e9976152121c7a4e3e6bec47","ref":"refs/heads/neurips_benchmarks","pushedAt":"2024-05-18T16:18:30.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"cell line and perturbation splits for counterfactual benchmark","shortMessageHtmlLink":"cell line and perturbation splits for counterfactual benchmark"}},{"before":"72ac33ecc34556444ad0d64004b40df8c8a6f1dd","after":"dfb9bb6b04565d90fa6febfae4f9423ebd393e80","ref":"refs/heads/gh-pages","pushedAt":"2024-05-17T10:12:26.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"protein peptide , counterfactual , scdti new tasks","shortMessageHtmlLink":"protein peptide , counterfactual , scdti new tasks"}},{"before":"b3921660ed1c30b7482ed877069594390c66045e","after":"72ac33ecc34556444ad0d64004b40df8c8a6f1dd","ref":"refs/heads/gh-pages","pushedAt":"2024-05-16T14:00:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"add new benchmarks for counterfactual and protein-peptide and fix scddti","shortMessageHtmlLink":"add new benchmarks for counterfactual and protein-peptide and fix scddti"}},{"before":"7f173ea92f410f99633bf01d3787e2b978fb91c6","after":"d736a6538b3a548d2c725f194629868df3f1d819","ref":"refs/heads/main","pushedAt":"2024-05-14T23:07:19.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"Merge pull request #263 from mims-harvard/neurips_benchmarks\n\nNeurips benchmarks -- Protein Peptide","shortMessageHtmlLink":"Merge pull request #263 from mims-harvard/neurips_benchmarks"}},{"before":"7f173ea92f410f99633bf01d3787e2b978fb91c6","after":"f2969bb319592a3e2bedaedcb22b3460cf9f6644","ref":"refs/heads/neurips_benchmarks","pushedAt":"2024-05-14T22:58:26.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"mend","shortMessageHtmlLink":"mend"}},{"before":"c28164258589e5156bd8dbb7816be659517714a7","after":"7f173ea92f410f99633bf01d3787e2b978fb91c6","ref":"refs/heads/neurips_benchmarks","pushedAt":"2024-05-14T20:34:15.000Z","pushType":"push","commitsCount":11,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"Merge pull request #262 from mims-harvard/package_release\n\npip packaging fix on deeppurpose. package minor release update","shortMessageHtmlLink":"Merge pull request #262 from mims-harvard/package_release"}},{"before":"14c4f800c61f958d1a355554e8f1b9581c33acef","after":"7f173ea92f410f99633bf01d3787e2b978fb91c6","ref":"refs/heads/main","pushedAt":"2024-05-14T20:11:37.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"amva13","name":"Alejandro Velez Arce","path":"/amva13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10442488?s=80&v=4"},"commit":{"message":"Merge pull request #262 from mims-harvard/package_release\n\npip packaging fix on deeppurpose. package minor release update","shortMessageHtmlLink":"Merge pull request #262 from mims-harvard/package_release"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEU2uu9QA","startCursor":null,"endCursor":null}},"title":"Activity ยท mims-harvard/TDC"}