You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Describe the bug
Tutorial notebooks require a dev install to run (due to missing dependency tqdm).
Full code that generate the error
As part of this JOSS review, I followed the installation instructions for mamba + downloaded the repo using git clone here. However, I DID NOT perform a dev install (pip install .) and attempted to run the docs/tutorial/fetch_walkthrough.ipynb notebook. The first call to fetch (grid = fetch.bedmap2( layer="thickness", verbose="q", ) failed with ValueError: Missing package 'tqdm' required for progress bars..
As a user, I would expect that I can follow the installation instructions, clone the repo (or download a tutorial notebook) and it will run without further environment management or local install. I'm not familiar enough with packaging with pyproject to quickly debug, but it looks like somehow tqdm isn't getting picked up as a dependency during the conda/mamba installation (is it sill default with pooch[progress] as noted in pyproject.toml)?).
👋 Thanks for opening your first issue here! Please make sure you filled out the template with as much detail as possible. You might also want to take a look at our contributing guidelines.
JessicaS11
changed the title
Clarify installation instructions for interactive features and update dependencies
tqdm dependency missing with conda-forge install
Apr 23, 2024
Thanks for opening this. That is strange that tqdm isn't being included. I will explicitly add it as a required dependency. Will be fixed as part of #195.
Describe the bug
Tutorial notebooks require a dev install to run (due to missing dependency
tqdm
).Full code that generate the error
As part of this JOSS review, I followed the installation instructions for mamba + downloaded the repo using
git clone
here. However, I DID NOT perform a dev install (pip install .
) and attempted to run thedocs/tutorial/fetch_walkthrough.ipynb
notebook. The first call to fetch (grid = fetch.bedmap2( layer="thickness", verbose="q", )
failed withValueError: Missing package 'tqdm' required for progress bars.
.As a user, I would expect that I can follow the installation instructions, clone the repo (or download a tutorial notebook) and it will run without further environment management or local install. I'm not familiar enough with packaging with pyproject to quickly debug, but it looks like somehow
tqdm
isn't getting picked up as a dependency during the conda/mamba installation (is it sill default withpooch[progress]
as noted inpyproject.toml
)?).The text was updated successfully, but these errors were encountered: