{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":127300962,"defaultBranch":"master","name":"HiC_tools","ownerLogin":"mdozmorov","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2018-03-29T14:10:41.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/864945?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1522332653.0","currentOid":""},"activityList":{"items":[{"before":"238537277a618c06fc92e1cfa4197cc6c4f5478c","after":"58d78fe458d3347f5c9b1b763b89067f1c968c6f","ref":"refs/heads/master","pushedAt":"2024-05-23T19:53:34.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add https://github.com/SFGLab/nf-hichip and https://github.com/SFGLab/gStripe","shortMessageHtmlLink":"Add <a href=\"https://github.com/SFGLab/nf-hichip\">https://github.com/SFGLab/nf-hichip</a> and <a href=\"https://github.com/SFGLab/gStripe\">https://github.com/SFGLab…</a>"}},{"before":"c3f5cf32d657439c401c23b442391d6ebbf6c90f","after":"238537277a618c06fc92e1cfa4197cc6c4f5478c","ref":"refs/heads/master","pushedAt":"2024-05-20T17:31:20.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add GAGE-seq paper","shortMessageHtmlLink":"Add GAGE-seq paper"}},{"before":"e2a285876ce03074c72ff8f4420535fd13bc71fc","after":"c3f5cf32d657439c401c23b442391d6ebbf6c90f","ref":"refs/heads/master","pushedAt":"2024-05-16T18:53:07.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add LiMCA scHi-C and scRNA-seq profiling","shortMessageHtmlLink":"Add LiMCA scHi-C and scRNA-seq profiling"}},{"before":"7aeb5be3821cfd0244c520c652f7928a18530a14","after":"e2a285876ce03074c72ff8f4420535fd13bc71fc","ref":"refs/heads/master","pushedAt":"2024-05-13T01:29:35.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add https://github.com/dfguan/pin_hic","shortMessageHtmlLink":"Add <a href=\"https://github.com/dfguan/pin_hic\">https://github.com/dfguan/pin_hic</a>"}},{"before":"22de60a99fcd0a036641321a1285df2e410293c0","after":"7aeb5be3821cfd0244c520c652f7928a18530a14","ref":"refs/heads/master","pushedAt":"2024-05-02T01:59:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add https://github.com/CSUBioGroup/Bacon","shortMessageHtmlLink":"Add <a href=\"https://github.com/CSUBioGroup/Bacon\">https://github.com/CSUBioGroup/Bacon</a>"}},{"before":"4843187e782356a632b0cbd6907b0ad5f1ab1244","after":"22de60a99fcd0a036641321a1285df2e410293c0","ref":"refs/heads/master","pushedAt":"2024-04-30T09:12:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add https://github.com/nedashokraneh/vssHiC","shortMessageHtmlLink":"Add <a href=\"https://github.com/nedashokraneh/vssHiC\">https://github.com/nedashokraneh/vssHiC</a>"}},{"before":"0ffe2a343afeab3048512b1428e9b22cc03781a5","after":"4843187e782356a632b0cbd6907b0ad5f1ab1244","ref":"refs/heads/master","pushedAt":"2024-04-30T08:43:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add https://github.com/JRowleyLab/HiCrayon","shortMessageHtmlLink":"Add <a href=\"https://github.com/JRowleyLab/HiCrayon\">https://github.com/JRowleyLab/HiCrayon</a>"}},{"before":"5aa4770cbbf42e7c44807a9314e4d06a5ee966ea","after":"0ffe2a343afeab3048512b1428e9b22cc03781a5","ref":"refs/heads/master","pushedAt":"2024-04-24T17:43:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Update notes for Micro-C https://doi.org/10.1016/j.cell.2015.05.048","shortMessageHtmlLink":"Update notes for Micro-C <a href=\"https://doi.org/10.1016/j.cell.2015.05.048\" rel=\"nofollow\">https://doi.org/10.1016/j.cell.2015.05.048</a>"}},{"before":"12d16bab1e38006eceb45b8038fae62aeef1e34f","after":"5aa4770cbbf42e7c44807a9314e4d06a5ee966ea","ref":"refs/heads/master","pushedAt":"2024-04-24T01:49:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"More details about Micro-C analysis","shortMessageHtmlLink":"More details about Micro-C analysis"}},{"before":"fee9a4cc5889102e3ad7e8bc55ef58441d69d6e1","after":"12d16bab1e38006eceb45b8038fae62aeef1e34f","ref":"refs/heads/master","pushedAt":"2024-03-15T16:09:19.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Merge branch 'master' of https://github.com/mdozmorov/HiC_tools","shortMessageHtmlLink":"Merge branch 'master' of <a href=\"https://github.com/mdozmorov/HiC_tools\">https://github.com/mdozmorov/HiC_tools</a>"}},{"before":"6e94f10b23d1355da30d930202214be8429e564d","after":"fee9a4cc5889102e3ad7e8bc55ef58441d69d6e1","ref":"refs/heads/master","pushedAt":"2024-03-02T01:56:38.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Merge pull request #16 from contessoto/master\n\nUpdate README.md","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2164270232\" data-permission-text=\"Title is private\" data-url=\"https://github.com/mdozmorov/HiC_tools/issues/16\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/mdozmorov/HiC_tools/pull/16/hovercard\" href=\"https://github.com/mdozmorov/HiC_tools/pull/16\">#16</a> from contessoto/master"}},{"before":"92936b7f9f6bd468ce00746430540ad637c9f6b9","after":"6e94f10b23d1355da30d930202214be8429e564d","ref":"refs/heads/master","pushedAt":"2023-12-14T11:01:33.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Merge pull request #15 from Kelly-ST-HRI/patch-1\n\nLink to GOTHiC github repo","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2040984398\" data-permission-text=\"Title is private\" data-url=\"https://github.com/mdozmorov/HiC_tools/issues/15\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/mdozmorov/HiC_tools/pull/15/hovercard\" href=\"https://github.com/mdozmorov/HiC_tools/pull/15\">#15</a> from Kelly-ST-HRI/patch-1"}},{"before":"537b25414127f9464d70da56713d6bda230a5fdd","after":"92936b7f9f6bd468ce00746430540ad637c9f6b9","ref":"refs/heads/master","pushedAt":"2023-10-30T01:19:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add https://github.com/DominikSzabo1/Meltron","shortMessageHtmlLink":"Add <a href=\"https://github.com/DominikSzabo1/Meltron\">https://github.com/DominikSzabo1/Meltron</a>"}},{"before":"a1850e2af23af5ca2e703ef793c9083d0cf90b88","after":"537b25414127f9464d70da56713d6bda230a5fdd","ref":"refs/heads/master","pushedAt":"2023-10-26T01:26:51.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add https://github.com/lyotvincent/HiBrowser","shortMessageHtmlLink":"Add <a href=\"https://github.com/lyotvincent/HiBrowser\">https://github.com/lyotvincent/HiBrowser</a>"}},{"before":"1baab799409bd66b711432c806c1b017809ceddb","after":"a1850e2af23af5ca2e703ef793c9083d0cf90b88","ref":"refs/heads/master","pushedAt":"2023-10-24T00:05:01.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add Review of computational tools for 3D genome analysis https://doi.org/10.1093/bib/bbad302","shortMessageHtmlLink":"Add Review of computational tools for 3D genome analysis <a href=\"https://doi.org/10.1093/bib/bbad302\" rel=\"nofollow\">https://doi.…</a>"}},{"before":"9f431ef49a32ac4110827465602114d4bc4df6db","after":"1baab799409bd66b711432c806c1b017809ceddb","ref":"refs/heads/master","pushedAt":"2023-10-13T11:45:18.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add GAGE-seq https://doi.org/10.1101/2023.07.20.549578","shortMessageHtmlLink":"Add GAGE-seq <a href=\"https://doi.org/10.1101/2023.07.20.549578\" rel=\"nofollow\">https://doi.org/10.1101/2023.07.20.549578</a>"}},{"before":"3ab4e89b7e9bef9303759e761bae4be5ba00f30f","after":"9f431ef49a32ac4110827465602114d4bc4df6db","ref":"refs/heads/master","pushedAt":"2023-10-07T11:17:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add Review of computational methods for 3D genome analysis https://doi.org/10.1038/s41576-023-00638-1","shortMessageHtmlLink":"Add Review of computational methods for 3D genome analysis <a href=\"https://doi.org/10.1038/s41576-023-00638-1\" rel=\"nofollow\">https://do…</a>"}},{"before":"0981c2fb1b1fdbddff9a3e6b2372a56d7b33d0e9","after":"3ab4e89b7e9bef9303759e761bae4be5ba00f30f","ref":"refs/heads/master","pushedAt":"2023-10-05T19:48:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add https://github.com/zhanglabtools/CIRCLET","shortMessageHtmlLink":"Add <a href=\"https://github.com/zhanglabtools/CIRCLET\">https://github.com/zhanglabtools/CIRCLET</a>"}},{"before":"f8e0c63a043c2d75d3e520126f38a15bf0da73a2","after":"0981c2fb1b1fdbddff9a3e6b2372a56d7b33d0e9","ref":"refs/heads/master","pushedAt":"2023-09-26T11:05:24.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add https://github.com/lhqxinghun/TADfit","shortMessageHtmlLink":"Add <a href=\"https://github.com/lhqxinghun/TADfit\">https://github.com/lhqxinghun/TADfit</a>"}},{"before":"938a57387ed380d20110a04dc6b4f0e49dccd456","after":"f8e0c63a043c2d75d3e520126f38a15bf0da73a2","ref":"refs/heads/master","pushedAt":"2023-08-27T13:25:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add https://github.com/lihan97/sslHiC","shortMessageHtmlLink":"Add <a href=\"https://github.com/lihan97/sslHiC\">https://github.com/lihan97/sslHiC</a>"}},{"before":"7b1a2cfde0b90a3414c6abbcc4e82e6cf92fe865","after":"938a57387ed380d20110a04dc6b4f0e49dccd456","ref":"refs/heads/master","pushedAt":"2023-08-08T00:31:18.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add https://github.com/agalitsyna/fontanka","shortMessageHtmlLink":"Add <a href=\"https://github.com/agalitsyna/fontanka\">https://github.com/agalitsyna/fontanka</a>"}},{"before":"e511a0cb6e0fccf5fb61320206e9114d5ef91396","after":"7b1a2cfde0b90a3414c6abbcc4e82e6cf92fe865","ref":"refs/heads/master","pushedAt":"2023-07-20T13:09:08.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add 4DN review, https://doi.org/10.1016/j.molcel.2023.06.018","shortMessageHtmlLink":"Add 4DN review, <a href=\"https://doi.org/10.1016/j.molcel.2023.06.018\" rel=\"nofollow\">https://doi.org/10.1016/j.molcel.2023.06.018</a>"}},{"before":"10523061c992a35c3445ea9d2cb9c35b91a533c8","after":"e511a0cb6e0fccf5fb61320206e9114d5ef91396","ref":"refs/heads/master","pushedAt":"2023-07-09T11:08:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add Tri-C technology paper https://doi.org/10.1038/s41588-018-0253-2","shortMessageHtmlLink":"Add Tri-C technology paper <a href=\"https://doi.org/10.1038/s41588-018-0253-2\" rel=\"nofollow\">https://doi.org/10.1038/s41588-018-0253-2</a>"}},{"before":"6e7edaeca13cdfe8c3853dc2ce9466e81e2ef07a","after":"10523061c992a35c3445ea9d2cb9c35b91a533c8","ref":"refs/heads/master","pushedAt":"2023-07-03T00:14:59.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Update https://bioconductor.org/packages/Chicago/","shortMessageHtmlLink":"Update <a href=\"https://bioconductor.org/packages/Chicago/\" rel=\"nofollow\">https://bioconductor.org/packages/Chicago/</a>"}},{"before":"b7bb1f42116d09b6f4880eea1913fc5beb34f8bf","after":"6e7edaeca13cdfe8c3853dc2ce9466e81e2ef07a","ref":"refs/heads/master","pushedAt":"2023-07-02T18:09:36.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add Promoter Capture Hi-C https://www.jove.com/video/57320","shortMessageHtmlLink":"Add Promoter Capture Hi-C <a href=\"https://www.jove.com/video/57320\" rel=\"nofollow\">https://www.jove.com/video/57320</a>"}},{"before":"15dbbaf7cdfe531eb0f58af6466b0c60c77c0356","after":"b7bb1f42116d09b6f4880eea1913fc5beb34f8bf","ref":"refs/heads/master","pushedAt":"2023-06-28T01:29:04.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add Multiplex-GAM technology, https://github.com/pombo-lab/multiplex-gam-2023","shortMessageHtmlLink":"Add Multiplex-GAM technology, <a href=\"https://github.com/pombo-lab/multiplex-gam-2023\">https://github.com/pombo-lab/multiplex-…</a>"}},{"before":"495ba66c437308743d94d2c1ee8dff240bd46ecf","after":"15dbbaf7cdfe531eb0f58af6466b0c60c77c0356","ref":"refs/heads/master","pushedAt":"2023-06-26T18:23:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Update https://github.com/JavierreLab/liCHiC paper","shortMessageHtmlLink":"Update <a href=\"https://github.com/JavierreLab/liCHiC\">https://github.com/JavierreLab/liCHiC</a> paper"}},{"before":"d04880644edd0cc4b0b980b6b1a150d90598cfe4","after":"495ba66c437308743d94d2c1ee8dff240bd46ecf","ref":"refs/heads/master","pushedAt":"2023-06-12T19:51:33.269Z","pushType":"push","commitsCount":1,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Fix license","shortMessageHtmlLink":"Fix license"}},{"before":"76b6ed8a56647ea701583b329d2157be1faeaa62","after":"d04880644edd0cc4b0b980b6b1a150d90598cfe4","ref":"refs/heads/master","pushedAt":"2023-06-01T13:43:41.119Z","pushType":"push","commitsCount":1,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add Benchmarking of 11 methods for Hi-C map comparisons https://www.biorxiv.org/content/10.1101/2023.04.04.535480v1","shortMessageHtmlLink":"Add Benchmarking of 11 methods for Hi-C map comparisons <a href=\"https://www.biorxiv.org/content/10.1101/2023.04.04.535480v1\" rel=\"nofollow\">https://www.b…</a>"}},{"before":"ae41ad22f75c53737b6b956e272a168b0049ed32","after":"76b6ed8a56647ea701583b329d2157be1faeaa62","ref":"refs/heads/master","pushedAt":"2023-05-31T11:43:10.887Z","pushType":"push","commitsCount":1,"pusher":{"login":"mdozmorov","name":"Mikhail Dozmorov","path":"/mdozmorov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/864945?s=80&v=4"},"commit":{"message":"Add Benchmarking of three genome assemblers https://doi.org/10.1101/2023.05.16.540917","shortMessageHtmlLink":"Add Benchmarking of three genome assemblers <a href=\"https://doi.org/10.1101/2023.05.16.540917\" rel=\"nofollow\">https://doi.org/10.1101/2…</a>"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEUmY4jAA","startCursor":null,"endCursor":null}},"title":"Activity · mdozmorov/HiC_tools"}