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fix --predictChIPDict for cutNX #973

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katsikora opened this issue Jan 26, 2024 · 0 comments
Open

fix --predictChIPDict for cutNX #973

katsikora opened this issue Jan 26, 2024 · 0 comments
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bug ChIP-Seq External Tool An update/modification of an external tool is needed

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@katsikora
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--predictChIPDict ran on projects without control samples gives a dictionary, in which controls as listed as quoted empty strings. Parsing this in ChIP-seq results in control samples being recognized as empty strings and missing input error for some of the rules that expect control samples.

Related to #967

@katsikora katsikora added bug ChIP-Seq External Tool An update/modification of an external tool is needed labels Jan 26, 2024
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Labels
bug ChIP-Seq External Tool An update/modification of an external tool is needed
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