Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

make splitSampleSheet more flexible and include any column between name and condition #955

Open
katsikora opened this issue Nov 10, 2023 · 0 comments
Open

make splitSampleSheet more flexible and include any column between name and condition #955

katsikora opened this issue Nov 10, 2023 · 0 comments
Labels
enhancement RNA-seq

Comments

@katsikora
Copy link
Contributor

Currently, splitSampleSheet looks for a "batch" column, in addition to name and condition.
Make it flexible, so that any column between name and condition might be included - so that it can be used as blocking factor in downstream DESeq2 analysis.
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
enhancement RNA-seq
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@katsikora