GitHub - lucylw/pathhier: Annotate pathways using the Pathway Ontology and align similar pathways

Name		Name	Last commit message	Last commit date
Latest commit History 203 Commits
config		config
data		data
model		model
output		output
pathhier		pathhier
scripts		scripts
.gitignore		.gitignore
LICENSE		LICENSE
README.md		README.md
align_pathways.py		align_pathways.py
requirements.txt		requirements.txt
run_aligner.py		run_aligner.py
setup.py		setup.py
setup.sh		setup.sh

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Generate a combined hierarchy of biological pathways from different knowledgebases

A subset of labeled pathway-PW class mappings is available at: https://docs.google.com/spreadsheets/d/1dkIk7pgCNqJpdrtdTQ65qWFotnS3ToUmYnPLALt1Oac/edit?usp=sharing

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Annotate pathways using the Pathway Ontology and align similar pathways

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