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minor question on extract sequence embeddings #39

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Azai-yx opened this issue Mar 18, 2024 · 1 comment
Open

minor question on extract sequence embeddings #39

Azai-yx opened this issue Mar 18, 2024 · 1 comment

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@Azai-yx
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Azai-yx commented Mar 18, 2024

Thanks for adopting the Enformer model to PyTorch.
Recently, I've needed to extract sequence embeddings from Enformer. Do I have to use one-hot encoding as input, or can I directly use sequences instead?

@jeffhsu3
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The model itself takes one-hot encodings.

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