Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Improve mapping bias estimates #90

Open
lima1 opened this issue Jun 11, 2019 · 0 comments
Open

Improve mapping bias estimates #90

lima1 opened this issue Jun 11, 2019 · 0 comments
Assignees
@lima1
Labels
enhancement
Projects
Accuracy improvements
Milestone
Bioconductor 3.11...

Comments

@lima1
Copy link
Owner

lima1 commented Jun 11, 2019

Current heuristic simply uses neighboring SNPs. Would be better to train a regression model using database generating that takes distance, number of samples and coverage into account. Simple to benchmark by leave-one-out simulations.
@lima1 lima1 self-assigned this Jun 11, 2019
@lima1 lima1 added this to To Do in Accuracy improvements Sep 14, 2019
@lima1 lima1 added this to the Bioconductor 3.11 Release milestone Oct 23, 2019
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees

@lima1 lima1

Labels
enhancement
Projects
Accuracy improvements
To Do
Milestone
Bioconductor 3.11 Release
Development

No branches or pull requests
1 participant
@lima1